Variant report
| Variant | rs10054574 |
|---|---|
| Chromosome Location | chr5:79927010-79927011 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:79906600-79949200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr5:79909800-79927200 | Weak transcription | Primary T cells from cord blood | blood |
| 3 | chr5:79911800-79927200 | Weak transcription | HMEC | breast |
| 4 | chr5:79912000-79938000 | Weak transcription | Brain Anterior Caudate | brain |
| 5 | chr5:79912200-79928600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 6 | chr5:79912200-79948000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 7 | chr5:79913200-79949000 | Weak transcription | Spleen | Spleen |
| 8 | chr5:79913600-79949400 | Weak transcription | Esophagus | oesophagus |
| 9 | chr5:79913800-79927200 | Weak transcription | A549 | lung |
| 10 | chr5:79914200-79949400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 11 | chr5:79914800-79927400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 12 | chr5:79915400-79949200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 13 | chr5:79915600-79934600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 14 | chr5:79915800-79927200 | Weak transcription | Aorta | Aorta |
| 15 | chr5:79916200-79927200 | Weak transcription | Osteobl | bone |
| 16 | chr5:79916200-79936200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 17 | chr5:79916400-79932800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 18 | chr5:79916600-79949400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 19 | chr5:79917000-79935800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 20 | chr5:79918800-79927200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 21 | chr5:79919000-79936200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 22 | chr5:79919600-79949200 | Weak transcription | Colonic Mucosa | Colon |
| 23 | chr5:79919600-79949800 | Weak transcription | Pancreas | Pancrea |
| 24 | chr5:79919800-79934400 | Weak transcription | Ovary | ovary |
| 25 | chr5:79919800-79949000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 26 | chr5:79920000-79927200 | Weak transcription | Liver | Liver |
| 27 | chr5:79920200-79935600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 28 | chr5:79920200-79936400 | Weak transcription | NHLF | lung |
| 29 | chr5:79920200-79949000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 30 | chr5:79920200-79949000 | Weak transcription | Stomach Mucosa | stomach |
| 31 | chr5:79920400-79927400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 32 | chr5:79920600-79935200 | Weak transcription | Fetal Kidney | kidney |
| 33 | chr5:79921000-79927200 | Weak transcription | Small Intestine | intestine |
| 34 | chr5:79921400-79935800 | Weak transcription | Brain Substantia Nigra | brain |
| 35 | chr5:79921600-79927600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 36 | chr5:79921800-79936800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 37 | chr5:79923000-79936600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 38 | chr5:79923200-79927200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 39 | chr5:79923600-79927200 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 40 | chr5:79923600-79927400 | Weak transcription | NHEK | skin |
| 41 | chr5:79923600-79933400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 42 | chr5:79923600-79939600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 43 | chr5:79923600-79949800 | Weak transcription | Brain Hippocampus Middle | brain |
| 44 | chr5:79923800-79927200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 45 | chr5:79923800-79927200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 46 | chr5:79923800-79927800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 47 | chr5:79923800-79936200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 48 | chr5:79924000-79934400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 49 | chr5:79924000-79934800 | Weak transcription | Fetal Brain Female | brain |
| 50 | chr5:79924000-79936600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
