Variant report
| Variant | rs6453522 |
|---|---|
| Chromosome Location | chr5:79931785-79931786 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:79906600-79949200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr5:79912000-79938000 | Weak transcription | Brain Anterior Caudate | brain |
| 3 | chr5:79912200-79948000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 4 | chr5:79913200-79949000 | Weak transcription | Spleen | Spleen |
| 5 | chr5:79913600-79949400 | Weak transcription | Esophagus | oesophagus |
| 6 | chr5:79914200-79949400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 7 | chr5:79915400-79949200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 8 | chr5:79915600-79934600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 9 | chr5:79916200-79936200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 10 | chr5:79916400-79932800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 11 | chr5:79916600-79949400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 12 | chr5:79917000-79935800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 13 | chr5:79919000-79936200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 14 | chr5:79919600-79949200 | Weak transcription | Colonic Mucosa | Colon |
| 15 | chr5:79919600-79949800 | Weak transcription | Pancreas | Pancrea |
| 16 | chr5:79919800-79934400 | Weak transcription | Ovary | ovary |
| 17 | chr5:79919800-79949000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 18 | chr5:79920200-79935600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 19 | chr5:79920200-79936400 | Weak transcription | NHLF | lung |
| 20 | chr5:79920200-79949000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 21 | chr5:79920200-79949000 | Weak transcription | Stomach Mucosa | stomach |
| 22 | chr5:79920600-79935200 | Weak transcription | Fetal Kidney | kidney |
| 23 | chr5:79921400-79935800 | Weak transcription | Brain Substantia Nigra | brain |
| 24 | chr5:79921800-79936800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 25 | chr5:79923000-79936600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 26 | chr5:79923600-79933400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 27 | chr5:79923600-79939600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 28 | chr5:79923600-79949800 | Weak transcription | Brain Hippocampus Middle | brain |
| 29 | chr5:79923800-79936200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 30 | chr5:79924000-79934400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 31 | chr5:79924000-79934800 | Weak transcription | Fetal Brain Female | brain |
| 32 | chr5:79924000-79936600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 33 | chr5:79924200-79936200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 34 | chr5:79924200-79936600 | Weak transcription | Lung | lung |
| 35 | chr5:79924200-79949200 | Weak transcription | Colon Smooth Muscle | Colon |
| 36 | chr5:79924200-79949400 | Weak transcription | Right Ventricle | heart |
| 37 | chr5:79924200-79949800 | Weak transcription | Left Ventricle | heart |
| 38 | chr5:79924400-79945800 | Strong transcription | Dnd41 | blood |
| 39 | chr5:79924400-79949200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 40 | chr5:79924600-79940000 | Weak transcription | Fetal Heart | heart |
| 41 | chr5:79924800-79943000 | Weak transcription | Brain Germinal Matrix | brain |
| 42 | chr5:79925000-79938600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 43 | chr5:79925000-79946200 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 44 | chr5:79925200-79934000 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 45 | chr5:79925200-79939400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 46 | chr5:79925200-79945600 | Strong transcription | Fetal Thymus | thymus |
| 47 | chr5:79925200-79945800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 48 | chr5:79925200-79948400 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 49 | chr5:79925200-79948600 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 50 | chr5:79925600-79936400 | Weak transcription | HSMM | muscle |
