The 2.0 version of rSNPBase

Variant report

Variant rs10061864
Chromosome Location chr5:108390184-108390185
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108350800-108390400 Weak transcription HSMMtube muscle
2 chr5:108356000-108399000 Weak transcription HSMM muscle
3 chr5:108360400-108400400 Weak transcription NHEK skin
4 chr5:108360400-108404800 Weak transcription Colon Smooth Muscle Colon
5 chr5:108360400-108425200 Weak transcription Aorta Aorta
6 chr5:108376400-108392600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr5:108377000-108399000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr5:108380000-108391200 Weak transcription Primary hematopoietic stem cells blood
9 chr5:108386200-108390400 Weak transcription Fetal Intestine Large intestine
10 chr5:108387600-108395200 Weak transcription Fetal Stomach stomach
11 chr5:108387800-108394800 Weak transcription Left Ventricle heart
12 chr5:108388000-108390400 Weak transcription Fetal Lung lung
13 chr5:108388000-108396600 Weak transcription Adipose Nuclei Adipose
14 chr5:108388000-108401200 Weak transcription Gastric stomach
15 chr5:108388200-108390200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr5:108388200-108390400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr5:108388200-108391200 Weak transcription Fetal Muscle Trunk muscle
18 chr5:108388200-108391400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr5:108388200-108391400 Weak transcription Dnd41 blood
20 chr5:108388200-108391800 Weak transcription Fetal Muscle Leg muscle
21 chr5:108388200-108393200 Weak transcription Pancreas Pancrea
22 chr5:108388200-108396000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr5:108388200-108401800 Weak transcription Ovary ovary
24 chr5:108388400-108390400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr5:108388400-108391800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr5:108388400-108392600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr5:108388800-108396600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr5:108388800-108397600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr5:108388800-108412000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr5:108389000-108396200 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr5:108389400-108390400 Enhancers Cortex derived primary cultured neurospheres brain
32 chr5:108389800-108390200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
33 chr5:108389800-108390200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr5:108389800-108390200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
35 chr5:108389800-108390200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
36 chr5:108389800-108390200 Enhancers Stomach Smooth Muscle stomach
37 chr5:108389800-108390600 Enhancers Osteobl bone
38 chr5:108389800-108392200 Enhancers Fetal Heart heart
39 chr5:108390000-108390200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr5:108390000-108390200 Enhancers Muscle Satellite Cultured Cells --
41 chr5:108390000-108391000 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015