Variant report

Variant	rs10066997
Chromosome Location	chr5:151284557-151284558
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10079457	0.91[EUR][1000 genomes]
rs28633110	0.90[EUR][1000 genomes]
rs2913880	0.84[EUR][1000 genomes]
rs2913883	0.83[AFR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2913886	0.84[EUR][1000 genomes]
rs2913890	0.84[EUR][1000 genomes]
rs2964602	0.84[EUR][1000 genomes]
rs73794753	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7709656	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9324715	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151276400-151285200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr5:151276600-151285200	Weak transcription	Fetal Muscle Leg	muscle
3	chr5:151278600-151286000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr5:151279600-151285200	Weak transcription	HSMM	muscle
5	chr5:151280800-151285400	Enhancers	GM12878-XiMat	blood
6	chr5:151281000-151285200	Weak transcription	Aorta	Aorta
7	chr5:151281400-151285200	Weak transcription	NHDF-Ad	bronchial
8	chr5:151283200-151286000	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr5:151283400-151284600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
10	chr5:151283400-151286200	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
11	chr5:151284400-151284600	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr5:151284400-151284600	Enhancers	HSMMtube	muscle
13	chr5:151284400-151285000	Enhancers	Fetal Kidney	kidney
14	chr5:151284400-151285600	Enhancers	Pancreatic Islets	Pancreatic Islet
15	chr5:151284400-151286000	Bivalent Enhancer	Fetal Brain Female	brain
16	chr5:151284400-151286200	Enhancers	Muscle Satellite Cultured Cells	--
17	chr5:151284400-151286200	Enhancers	NH-A	brain
18	chr5:151284400-151286400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr5:151284400-151286600	Enhancers	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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