Variant report

Variant	rs10076931
Chromosome Location	chr5:113393705-113393706
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs13171100	0.88[EUR][1000 genomes]
rs1487227	0.91[CEU][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[TSI][hapmap];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs873511	0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv471042	chr5:113160490-113440892	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10076931	TRIM36	cis	parietal	SCAN

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113392000-113394600	Weak transcription	Lung	lung
2	chr5:113392200-113396400	Weak transcription	Brain Germinal Matrix	brain
3	chr5:113392400-113397200	Weak transcription	Pancreas	Pancrea
4	chr5:113392600-113394600	Weak transcription	Left Ventricle	heart
5	chr5:113392800-113396200	Weak transcription	Fetal Brain Male	brain
6	chr5:113393000-113394200	Weak transcription	Right Atrium	heart
7	chr5:113393000-113395800	Enhancers	Fetal Heart	heart
8	chr5:113393600-113394400	Enhancers	Skeletal Muscle Female	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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