Variant report

Variant	rs10082389
Chromosome Location	chr10:117427374-117427375
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10885761	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10885763	0.84[ASN][1000 genomes]
rs11197377	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11197398	0.84[ASN][1000 genomes]
rs11591491	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2245045	0.81[AMR][1000 genomes]
rs2420088	0.84[ASN][1000 genomes]
rs2532733	0.84[ASN][1000 genomes]
rs2769383	0.82[AMR][1000 genomes]
rs2769417	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2804235	0.82[AMR][1000 genomes]
rs2804237	0.82[AMR][1000 genomes]
rs2804250	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4751921	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4751922	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7072548	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7907186	0.83[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117425800-117427800	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr10:117427200-117433200	Weak transcription	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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