Variant report

Variant	rs11197377
Chromosome Location	chr10:117411033-117411034
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:117410949..117413224-chr10:117414912..117417094,2	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10082389	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10885745	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10885761	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10885763	0.83[ASN][1000 genomes]
rs11197327	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11197398	0.83[ASN][1000 genomes]
rs11591491	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1927479	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2245045	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2420088	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2532733	0.83[ASN][1000 genomes]
rs2769383	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2769389	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2769407	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2769417	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2804194	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2804199	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2804210	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2804235	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2804237	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2804250	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4751921	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4751922	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7072548	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72641352	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7907186	0.82[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117404600-117412800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr10:117409600-117412800	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr10:117411000-117411200	Enhancers	HSMM	muscle

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