Variant report

Variant	rs10100329
Chromosome Location	chr8:34339959-34339960
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10099704	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs10099911	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10100213	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10108508	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs16882266	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16882365	0.91[AMR][1000 genomes]
rs28505609	0.96[AFR][1000 genomes]
rs67908341	0.82[AMR][1000 genomes]
rs7009639	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs7014310	0.82[AMR][1000 genomes]
rs7815445	0.96[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv6147	chr8:34314029-34359124	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34338600-34340200	Enhancers	Fetal Kidney	kidney

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links