The 2.0 version of rSNPBase

Variant report

Variant rs10111789
Chromosome Location chr8:95468754-95468755
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:95432400-95478600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr8:95449400-95485200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr8:95449400-95486200 Weak transcription Fetal Muscle Leg muscle
4 chr8:95449800-95476200 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr8:95449800-95479600 Weak transcription NH-A brain
6 chr8:95450000-95486000 Weak transcription Primary hematopoietic stem cells blood
7 chr8:95450200-95480000 Weak transcription NHEK skin
8 chr8:95450400-95479800 Weak transcription HMEC breast
9 chr8:95450600-95478400 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr8:95450600-95484800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr8:95453000-95476000 Weak transcription HUVEC blood vessel
12 chr8:95453000-95476400 Weak transcription Thymus Thymus
13 chr8:95454000-95485600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr8:95454200-95485400 Weak transcription Fetal Intestine Small intestine
15 chr8:95455400-95485000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr8:95455600-95486200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr8:95456000-95471000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr8:95456000-95476200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr8:95457800-95475600 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr8:95458000-95472200 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr8:95458000-95472400 Weak transcription H1 Cell Line embryonic stem cell
22 chr8:95459800-95476400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr8:95460000-95485000 Weak transcription HepG2 liver
24 chr8:95460600-95471400 Weak transcription Fetal Stomach stomach
25 chr8:95461200-95469600 Weak transcription NHLF lung
26 chr8:95462000-95486400 Weak transcription Primary B cells from cord blood blood
27 chr8:95462800-95468800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr8:95464400-95479800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr8:95464400-95485800 Weak transcription Duodenum Mucosa Duodenum
30 chr8:95465200-95480600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr8:95466600-95471200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr8:95466800-95470600 Strong transcription Dnd41 blood
33 chr8:95467000-95468800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr8:95467000-95468800 Enhancers Fetal Lung lung
35 chr8:95467000-95469400 Weak transcription Fetal Thymus thymus
36 chr8:95467000-95469400 Flanking Active TSS GM12878-XiMat blood
37 chr8:95467000-95469800 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr8:95467000-95477200 Weak transcription K562 blood
39 chr8:95467400-95469200 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr8:95467800-95470000 Weak transcription HSMM muscle
41 chr8:95467800-95473000 Weak transcription A549 lung
42 chr8:95468000-95468800 Active TSS Primary T helper 17 cells PMA-I stimulated --
43 chr8:95468000-95480400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr8:95468000-95485200 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr8:95468200-95468800 Active TSS Primary T helper memory cells from peripheral blood 1 blood
46 chr8:95468200-95468800 Active TSS Primary T regulatory cells fromperipheralblood blood
47 chr8:95468200-95469000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr8:95468200-95469200 Enhancers Osteobl bone
49 chr8:95468400-95468800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr8:95468400-95469000 Enhancers Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015