Variant report

Variant	rs10113289
Chromosome Location	chr8:78126326-78126327
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10112891	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12543187	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12545842	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1452814	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2123405	0.85[EUR][1000 genomes]
rs4329252	0.82[TSI][hapmap]
rs57620618	0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6473022	0.82[TSI][hapmap]
rs6980885	0.85[EUR][1000 genomes]
rs6995053	0.85[EUR][1000 genomes]
rs6998668	0.85[EUR][1000 genomes]
rs7014996	0.85[EUR][1000 genomes]
rs7825782	0.84[EUR][1000 genomes]
rs7845658	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891045	chr8:77998659-78477561	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1029314	chr8:78107849-78129934	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
3	esv2756011	chr8:78108034-78160132	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
4	esv3479511	chr8:78124961-78126326	Enhancers	n/a	n/a	inside rSNPs	n/a
5	esv3479512	chr8:78125009-78126326	Enhancers	n/a	n/a	inside rSNPs	n/a
6	nsv611566	chr8:78126326-78245535	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:78125400-78126400	Enhancers	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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