Variant report

Variant	rs1011494
Chromosome Location	chr12:117083185-117083186
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1011493	0.90[ASN][1000 genomes]
rs10744880	0.90[ASN][1000 genomes]
rs10850689	0.90[ASN][1000 genomes]
rs10850690	0.92[ASN][1000 genomes]
rs10850691	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11068121	0.98[ASN][1000 genomes]
rs1496251	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1496252	0.82[ASN][1000 genomes]
rs1566020	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1566021	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs728861	0.90[ASN][1000 genomes]
rs7297326	0.85[ASN][1000 genomes]
rs7308010	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7953561	0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7953582	0.91[ASN][1000 genomes]
rs903820	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs953004	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117069600-117083600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr12:117074200-117084000	Weak transcription	Gastric	stomach
3	chr12:117078000-117085800	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr12:117078400-117084200	Weak transcription	Pancreas	Pancrea
5	chr12:117078400-117085600	Weak transcription	Thymus	Thymus
6	chr12:117080600-117088000	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr12:117080600-117088000	Weak transcription	Adipose Nuclei	Adipose
8	chr12:117080800-117083800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr12:117081000-117083600	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr12:117081200-117085400	Weak transcription	Dnd41	blood
11	chr12:117081400-117085000	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr12:117082200-117084400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr12:117082400-117086200	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr12:117083000-117083200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
15	chr12:117083000-117084400	Enhancers	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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