Variant report

Variant	rs10115299
Chromosome Location	chr14:85833937-85833938
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10820810	0.86[EUR][1000 genomes]
rs10820813	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1360089	0.84[EUR][1000 genomes]
rs1815383	0.84[EUR][1000 genomes]
rs1987634	0.83[EUR][1000 genomes]
rs2225246	0.86[EUR][1000 genomes]
rs2518106	0.82[EUR][1000 genomes]
rs2518112	0.86[EUR][1000 genomes]
rs2518114	0.85[EUR][1000 genomes]
rs2518120	0.82[EUR][1000 genomes]
rs2518123	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2518128	0.85[EUR][1000 genomes]
rs2518131	0.81[EUR][1000 genomes]
rs2768283	0.86[EUR][1000 genomes]
rs2768290	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2768291	0.81[EUR][1000 genomes]
rs2768294	0.81[EUR][1000 genomes]
rs2771041	0.84[EUR][1000 genomes]
rs2771042	0.84[EUR][1000 genomes]
rs2812308	0.84[EUR][1000 genomes]
rs4742947	0.86[EUR][1000 genomes]
rs4742948	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6477449	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7020083	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047924	chr14:85826280-85868228	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85832400-85840200	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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