Variant report

Variant rs10123424
Chromosome Location chr9:139684622-139684623
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139678400-139685000 Enhancers Fetal Intestine Small intestine
2 chr9:139681000-139684800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr9:139681800-139685800 Enhancers Stomach Mucosa stomach
4 chr9:139682000-139684800 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr9:139682000-139685000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr9:139682000-139685000 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr9:139682000-139685200 Enhancers Primary hematopoietic stem cells short term culture blood
8 chr9:139682000-139685400 Enhancers Duodenum Mucosa Duodenum
9 chr9:139682000-139685400 Enhancers Placenta Placenta
10 chr9:139682200-139684800 Weak transcription Brain Angular Gyrus brain
11 chr9:139682200-139684800 Weak transcription HSMM muscle
12 chr9:139682200-139685000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr9:139682400-139684800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr9:139682400-139685000 Weak transcription H1 Cell Line embryonic stem cell
15 chr9:139682400-139685000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr9:139682400-139685000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr9:139682400-139685400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr9:139682600-139684800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr9:139682600-139684800 Weak transcription Primary B cells from peripheral blood blood
20 chr9:139682600-139684800 Weak transcription Primary T cells fromperipheralblood blood
21 chr9:139682600-139684800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr9:139682600-139684800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr9:139682600-139684800 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr9:139682600-139684800 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr9:139682600-139684800 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr9:139682600-139684800 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr9:139682600-139684800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr9:139682600-139684800 Weak transcription Brain Anterior Caudate brain
29 chr9:139682600-139684800 Weak transcription Brain Germinal Matrix brain
30 chr9:139682600-139684800 Weak transcription Colon Smooth Muscle Colon
31 chr9:139682600-139684800 Weak transcription Stomach Smooth Muscle stomach
32 chr9:139682600-139684800 Weak transcription HUVEC blood vessel
33 chr9:139682600-139684800 Weak transcription NHEK skin
34 chr9:139682600-139685000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr9:139682600-139685000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr9:139682600-139685200 Enhancers Fetal Heart heart
37 chr9:139682800-139684800 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr9:139682800-139684800 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr9:139682800-139684800 Weak transcription Brain Cingulate Gyrus brain
40 chr9:139682800-139684800 Weak transcription GM12878-XiMat blood
41 chr9:139682800-139684800 Weak transcription HMEC breast
42 chr9:139682800-139685000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr9:139683200-139684800 Weak transcription Osteobl bone
44 chr9:139683400-139684800 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr9:139683400-139684800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr9:139683400-139684800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr9:139683400-139684800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr9:139683400-139684800 Weak transcription Colonic Mucosa Colon
49 chr9:139683400-139685200 Enhancers Fetal Intestine Large intestine
50 chr9:139683400-139685800 Enhancers Liver Liver

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