Variant report
| Variant | rs1015390 |
|---|---|
| Chromosome Location | chr12:48344038-48344039 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:48335800-48346000 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 2 | chr12:48338400-48348800 | Enhancers | HMEC | breast |
| 3 | chr12:48340400-48344200 | Enhancers | Esophagus | oesophagus |
| 4 | chr12:48341000-48344200 | Enhancers | HSMM | muscle |
| 5 | chr12:48341200-48347600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr12:48341800-48347600 | Weak transcription | Fetal Lung | lung |
| 7 | chr12:48342200-48346000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 8 | chr12:48342800-48344200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 9 | chr12:48342800-48344200 | Enhancers | Colonic Mucosa | Colon |
| 10 | chr12:48342800-48344400 | Enhancers | Liver | Liver |
| 11 | chr12:48342800-48344400 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 12 | chr12:48342800-48346000 | Enhancers | Placenta | Placenta |
| 13 | chr12:48342800-48346600 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 14 | chr12:48343000-48344200 | Flanking Active TSS | HepG2 | liver |
| 15 | chr12:48343000-48344400 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 16 | chr12:48343200-48344400 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 17 | chr12:48343400-48344200 | Bivalent Enhancer | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 18 | chr12:48343400-48344200 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 19 | chr12:48343400-48344600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 20 | chr12:48343400-48345200 | Flanking Active TSS | NHEK | skin |
| 21 | chr12:48343800-48344200 | Bivalent Enhancer | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 22 | chr12:48343800-48345000 | Genic enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 23 | chr12:48343800-48347600 | Weak transcription | Fetal Intestine Large | intestine |
| 24 | chr12:48344000-48344400 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 25 | chr12:48344000-48347800 | Weak transcription | Fetal Intestine Small | intestine |
