Variant report

Variant rs11168324
Chromosome Location chr12:48340370-48340371
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48335800-48346000 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr12:48336200-48340400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr12:48336600-48341200 Enhancers Rectal Mucosa Donor 29 rectum
4 chr12:48336600-48343200 Weak transcription Right Ventricle heart
5 chr12:48337200-48340400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr12:48337800-48343200 Weak transcription Pancreas Pancrea
7 chr12:48338200-48340600 Weak transcription Fetal Intestine Large intestine
8 chr12:48338400-48340600 Enhancers NHEK skin
9 chr12:48338400-48342400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr12:48338400-48348800 Enhancers HMEC breast
11 chr12:48338800-48340400 Weak transcription Spleen Spleen
12 chr12:48338800-48340600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr12:48338800-48341600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr12:48338800-48341600 Enhancers Fetal Kidney kidney
15 chr12:48338800-48341600 Enhancers Placenta Placenta
16 chr12:48338800-48343200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
17 chr12:48339000-48340400 Weak transcription Esophagus oesophagus
18 chr12:48339000-48341800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr12:48339200-48340400 Enhancers HSMM muscle
20 chr12:48339200-48342400 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr12:48339400-48341400 Enhancers Colonic Mucosa Colon
22 chr12:48339600-48340400 Enhancers Primary neutrophils fromperipheralblood blood
23 chr12:48339600-48340400 Enhancers HSMMtube muscle
24 chr12:48339600-48340600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr12:48339600-48340800 Enhancers Fetal Heart heart
26 chr12:48339600-48340800 Enhancers NHDF-Ad bronchial
27 chr12:48339800-48340800 Enhancers Fetal Intestine Small intestine
28 chr12:48339800-48340800 Bivalent Enhancer Fetal Muscle Leg muscle
29 chr12:48339800-48341000 Enhancers A549 lung
30 chr12:48339800-48341600 Enhancers Ovary ovary
31 chr12:48339800-48341800 Enhancers Fetal Lung lung
32 chr12:48340000-48341600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr12:48340200-48340400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr12:48340200-48340400 Enhancers Monocytes-CD14+_RO01746 blood
35 chr12:48340200-48340600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
36 chr12:48340200-48340600 Flanking Bivalent TSS/Enh HepG2 liver
37 chr12:48340200-48340800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
38 chr12:48340200-48340800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr12:48340200-48340800 Flanking Active TSS Osteobl bone
40 chr12:48340200-48341000 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
41 chr12:48340200-48341000 Enhancers Muscle Satellite Cultured Cells --
42 chr12:48340200-48341000 Flanking Active TSS Duodenum Mucosa Duodenum
43 chr12:48340200-48341200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr12:48340200-48341200 Enhancers Primary hematopoietic stem cells blood
45 chr12:48340200-48341200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
46 chr12:48340200-48341200 Flanking Active TSS Hela-S3 cervix
47 chr12:48340200-48341400 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr12:48340200-48341400 Enhancers Primary monocytes fromperipheralblood blood
49 chr12:48340200-48341400 Bivalent Enhancer Fetal Muscle Trunk muscle
50 chr12:48340200-48341600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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