Variant report

Variant	rs10156579
Chromosome Location	chr9:96594542-96594543
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10761263	0.86[EUR][1000 genomes]
rs10761278	0.81[EUR][1000 genomes]
rs10761279	0.81[EUR][1000 genomes]
rs10821224	0.81[EUR][1000 genomes]
rs10821239	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10992905	0.81[EUR][1000 genomes]
rs3996253	0.94[AFR][1000 genomes]
rs4604507	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4744288	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1824724	chr9:96582360-96598551	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96590600-96594800	Weak transcription	Spleen	Spleen
2	chr9:96592200-96594600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr9:96593400-96595600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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