Variant report

Variant	rs10992905
Chromosome Location	chr9:96571826-96571827
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10156579	0.81[EUR][1000 genomes]
rs10761263	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10761276	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10761277	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10761278	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10761279	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10761280	0.85[EUR][1000 genomes]
rs10821224	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10821225	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10821226	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10821227	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10821239	0.84[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs12000834	0.85[EUR][1000 genomes]
rs4604507	0.81[EUR][1000 genomes]
rs4744288	0.81[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96570000-96572400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr9:96570200-96572000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr9:96571000-96572000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr9:96571400-96576000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr9:96571600-96574200	Enhancers	K562	blood
6	chr9:96571800-96572000	ZNF genes & repeats	Spleen	Spleen
7	chr9:96571800-96572600	Bivalent Enhancer	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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