Variant report

Variant	rs10157326
Chromosome Location	chr1:172986155-172986156
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10158611	1.00[AMR][1000 genomes]
rs13373767	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831904	chr1:172912110-173070429	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv533953	chr1:172939335-173133255	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172981200-172987000	Weak transcription	HSMM	muscle
2	chr1:172982600-172990800	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr1:172984400-172988400	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr1:172984400-172990600	Enhancers	Primary B cells from peripheral blood	blood
5	chr1:172984600-172986800	Enhancers	Primary B cells from cord blood	blood
6	chr1:172984600-172988200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr1:172985000-172987600	Enhancers	Dnd41	blood
8	chr1:172985200-172988600	Enhancers	Primary hematopoietic stem cells	blood
9	chr1:172985400-172986200	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr1:172986000-172986400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr1:172986000-172987000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr1:172986000-172987000	Weak transcription	GM12878-XiMat	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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