The 2.0 version of rSNPBase

Variant report

Variant rs10178829
Chromosome Location chr2:30703505-30703506
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30671600-30704200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr2:30678400-30704200 Weak transcription Fetal Stomach stomach
3 chr2:30678600-30703800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr2:30678600-30710600 Weak transcription NHLF lung
5 chr2:30682400-30704400 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr2:30688400-30703800 Weak transcription Left Ventricle heart
7 chr2:30688400-30704200 Weak transcription Aorta Aorta
8 chr2:30688400-30704600 Weak transcription Rectal Smooth Muscle rectum
9 chr2:30688600-30710000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr2:30693600-30704000 Weak transcription A549 lung
11 chr2:30693600-30704000 Weak transcription HepG2 liver
12 chr2:30695200-30707000 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr2:30695400-30704400 Weak transcription Stomach Smooth Muscle stomach
14 chr2:30695600-30703600 Weak transcription GM12878-XiMat blood
15 chr2:30695600-30704200 Weak transcription Fetal Lung lung
16 chr2:30695600-30705400 Weak transcription Primary hematopoietic stem cells blood
17 chr2:30695800-30704000 Weak transcription NHDF-Ad bronchial
18 chr2:30695800-30704400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr2:30695800-30706600 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr2:30696000-30704200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr2:30696200-30710600 Weak transcription Ovary ovary
22 chr2:30697200-30704200 Weak transcription Fetal Intestine Large intestine
23 chr2:30697400-30710400 Weak transcription Fetal Kidney kidney
24 chr2:30697800-30704200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:30697800-30720800 Weak transcription Thymus Thymus
26 chr2:30698000-30708000 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr2:30698000-30709400 Weak transcription Pancreas Pancrea
28 chr2:30698200-30704200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr2:30698200-30704200 Weak transcription Right Atrium heart
30 chr2:30698200-30704400 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr2:30698200-30710600 Weak transcription Primary T cells fromperipheralblood blood
32 chr2:30698400-30706800 Weak transcription Primary B cells from peripheral blood blood
33 chr2:30698600-30704400 Weak transcription Primary B cells from cord blood blood
34 chr2:30699000-30704000 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr2:30699000-30709600 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr2:30699000-30711800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr2:30699600-30709400 Weak transcription Right Ventricle heart
38 chr2:30699800-30704200 Weak transcription Psoas Muscle Psoas
39 chr2:30700000-30703600 Weak transcription Fetal Heart heart
40 chr2:30701000-30703600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr2:30701200-30704400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr2:30701200-30705600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr2:30701200-30714400 Weak transcription HSMM muscle
44 chr2:30701400-30704200 Weak transcription Esophagus oesophagus
45 chr2:30701600-30704200 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr2:30702200-30704200 Weak transcription Fetal Thymus thymus
47 chr2:30702200-30704400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr2:30702800-30704200 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr2:30702800-30710400 Weak transcription Primary T cells from cord blood blood
50 chr2:30703400-30703600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015