The 2.0 version of rSNPBase

Variant report

Variant rs4952143
Chromosome Location chr2:30760232-30760233
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30729000-30764600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr2:30734800-30764000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:30743000-30761000 Weak transcription NHEK skin
4 chr2:30743000-30763600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:30743000-30764600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr2:30743000-30764600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr2:30743000-30767400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr2:30743000-30768000 Weak transcription Rectal Smooth Muscle rectum
9 chr2:30743200-30760800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr2:30749000-30812600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr2:30751000-30760800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr2:30751000-30766800 Weak transcription NHLF lung
13 chr2:30753000-30761000 Weak transcription Stomach Smooth Muscle stomach
14 chr2:30753600-30770000 Weak transcription Small Intestine intestine
15 chr2:30753800-30768600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr2:30756200-30760600 Weak transcription NH-A brain
17 chr2:30757800-30809000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr2:30758000-30760600 ZNF genes & repeats Fetal Lung lung
19 chr2:30758200-30795000 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr2:30758400-30765800 Weak transcription Aorta Aorta
21 chr2:30758600-30761400 Weak transcription Ovary ovary
22 chr2:30758600-30853800 Weak transcription Thymus Thymus
23 chr2:30758800-30784400 Weak transcription Primary T cells fromperipheralblood blood
24 chr2:30758800-30785000 Weak transcription Left Ventricle heart
25 chr2:30758800-30809600 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr2:30759000-30761200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr2:30759000-30785200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr2:30759200-30760800 Weak transcription Right Ventricle heart
29 chr2:30759200-30762200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr2:30759200-30767600 Weak transcription Fetal Kidney kidney
31 chr2:30759200-30805600 Weak transcription K562 blood
32 chr2:30759400-30761000 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr2:30759400-30763400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr2:30759400-30763600 Weak transcription Fetal Thymus thymus
35 chr2:30759400-30764400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr2:30759400-30764400 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr2:30759400-30764600 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr2:30759400-30767000 Weak transcription Fetal Heart heart
39 chr2:30759400-30769600 Weak transcription HepG2 liver
40 chr2:30759400-30785000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:30759400-30785000 Weak transcription Duodenum Mucosa Duodenum
42 chr2:30759400-30785000 Weak transcription Dnd41 blood
43 chr2:30759600-30763200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr2:30759600-30763800 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr2:30759600-30764000 Weak transcription Primary B cells from cord blood blood
46 chr2:30759600-30764400 Weak transcription HSMM muscle
47 chr2:30759600-30764600 Weak transcription Primary T cells from cord blood blood
48 chr2:30759600-30771200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr2:30759600-30786000 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr2:30759800-30760600 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015