The 2.0 version of rSNPBase

Variant report

Variant rs10190742
Chromosome Location chr2:86135176-86135177
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86128600-86141200 Weak transcription Primary T cells from cord blood blood
2 chr2:86129800-86137800 Weak transcription NHDF-Ad bronchial
3 chr2:86129800-86138000 Weak transcription Fetal Thymus thymus
4 chr2:86129800-86141400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr2:86130600-86138000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr2:86131400-86137800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr2:86131400-86142400 Weak transcription Esophagus oesophagus
8 chr2:86131600-86135400 Enhancers Brain Hippocampus Middle brain
9 chr2:86131800-86141600 Weak transcription Primary B cells from peripheral blood blood
10 chr2:86132000-86135200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr2:86133200-86137600 Weak transcription Brain Inferior Temporal Lobe brain
12 chr2:86133200-86137800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr2:86133200-86137800 Weak transcription Brain Cingulate Gyrus brain
14 chr2:86133200-86137800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr2:86133200-86139200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr2:86133200-86142800 Weak transcription Colon Smooth Muscle Colon
17 chr2:86133200-86149200 Weak transcription Stomach Smooth Muscle stomach
18 chr2:86133200-86152000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr2:86133800-86135400 Enhancers Placenta Placenta
20 chr2:86133800-86136800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr2:86133800-86139000 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr2:86134000-86135400 Enhancers Lung lung
23 chr2:86134000-86135800 Enhancers K562 blood
24 chr2:86134000-86136800 Enhancers HMEC breast
25 chr2:86134000-86136800 Enhancers NHEK skin
26 chr2:86134200-86135400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:86134200-86136000 Enhancers A549 lung
28 chr2:86134400-86135200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr2:86134400-86135400 Enhancers Osteobl bone
30 chr2:86134400-86136400 Weak transcription Brain Anterior Caudate brain
31 chr2:86134400-86136600 Enhancers HepG2 liver
32 chr2:86134400-86137200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:86134400-86148000 Weak transcription Thymus Thymus
34 chr2:86134600-86137800 Weak transcription Brain Substantia Nigra brain
35 chr2:86134800-86135200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr2:86134800-86135400 Enhancers Adipose Nuclei Adipose
37 chr2:86134800-86135600 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr2:86134800-86135800 Enhancers Muscle Satellite Cultured Cells --
39 chr2:86135000-86135200 Enhancers Fetal Muscle Leg muscle
40 chr2:86135000-86135200 Enhancers Fetal Stomach stomach
41 chr2:86135000-86135200 Enhancers Right Atrium heart
42 chr2:86135000-86135200 Enhancers Stomach Mucosa stomach
43 chr2:86135000-86135200 Enhancers NH-A brain
44 chr2:86135000-86135400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:86135000-86135400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr2:86135000-86135400 Enhancers Brain Angular Gyrus brain
47 chr2:86135000-86135400 Enhancers Fetal Muscle Trunk muscle
48 chr2:86135000-86135400 Enhancers Ovary ovary
49 chr2:86135000-86135400 Enhancers Pancreas Pancrea
50 chr2:86135000-86135400 Enhancers Right Ventricle heart

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Last update: Aug 31, 2015