The 2.0 version of rSNPBase

Variant report

Variant rs10198260
Chromosome Location chr2:86220680-86220681
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86204000-86221000 Weak transcription Right Atrium heart
2 chr2:86207000-86223400 Weak transcription Liver Liver
3 chr2:86214600-86221200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr2:86215600-86221000 Weak transcription HSMM muscle
5 chr2:86215800-86221000 Weak transcription Right Ventricle heart
6 chr2:86215800-86221000 Weak transcription Spleen Spleen
7 chr2:86216000-86221000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr2:86216000-86221000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr2:86216000-86221000 Weak transcription Thymus Thymus
10 chr2:86216000-86221200 Weak transcription NHDF-Ad bronchial
11 chr2:86216000-86222600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr2:86216000-86223400 Weak transcription Fetal Lung lung
13 chr2:86216200-86220800 Weak transcription Fetal Thymus thymus
14 chr2:86216200-86221000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr2:86216200-86221000 Weak transcription Colon Smooth Muscle Colon
16 chr2:86216200-86221000 Weak transcription Ovary ovary
17 chr2:86216200-86221000 Weak transcription Stomach Mucosa stomach
18 chr2:86216200-86221200 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr2:86216200-86222800 Weak transcription Rectal Smooth Muscle rectum
20 chr2:86216200-86225800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr2:86216400-86220800 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr2:86216400-86221000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr2:86216400-86221000 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr2:86216400-86223200 Weak transcription Pancreas Pancrea
25 chr2:86216400-86223400 Weak transcription Fetal Stomach stomach
26 chr2:86216600-86221200 Weak transcription Stomach Smooth Muscle stomach
27 chr2:86217200-86220800 Weak transcription Placenta Placenta
28 chr2:86217400-86221000 Weak transcription Fetal Heart heart
29 chr2:86217600-86221200 Weak transcription A549 lung
30 chr2:86217600-86221200 Weak transcription Hela-S3 cervix
31 chr2:86218000-86221000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr2:86218400-86220800 Weak transcription Fetal Muscle Leg muscle
33 chr2:86218400-86221000 Weak transcription Psoas Muscle Psoas
34 chr2:86218400-86221200 Weak transcription Gastric stomach
35 chr2:86218400-86223000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr2:86219800-86221000 Enhancers Monocytes-CD14+_RO01746 blood
37 chr2:86219800-86221200 Enhancers GM12878-XiMat blood
38 chr2:86219800-86221600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr2:86219800-86221800 Enhancers Primary B cells from cord blood blood
40 chr2:86219800-86224600 Enhancers Adipose Nuclei Adipose
41 chr2:86219800-86226400 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr2:86219800-86228600 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr2:86219800-86228800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr2:86219800-86229000 Enhancers Primary B cells from peripheral blood blood
45 chr2:86219800-86229200 Enhancers Primary monocytes fromperipheralblood blood
46 chr2:86220000-86221000 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr2:86220000-86221000 Weak transcription HSMMtube muscle
48 chr2:86220000-86221400 Weak transcription Brain Hippocampus Middle brain
49 chr2:86220000-86223800 Weak transcription Esophagus oesophagus
50 chr2:86220200-86220800 Enhancers K562 blood

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Last update: Aug 31, 2015