Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1009142	0.83[CEU][hapmap];0.82[CHB][hapmap];0.81[ASN][1000 genomes]
rs10174916	0.87[ASN][1000 genomes]
rs11679779	0.86[EUR][1000 genomes]
rs11679860	0.82[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs11684753	0.82[EUR][1000 genomes]
rs11687988	0.90[EUR][1000 genomes]
rs11691078	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11695852	0.83[EUR][1000 genomes]
rs12619171	0.87[EUR][1000 genomes]
rs12694244	0.82[EUR][1000 genomes]
rs1818751	0.87[EUR][1000 genomes]
rs1976834	1.00[CEU][hapmap];0.82[CHB][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2371304	0.83[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs2371305	0.84[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs2888004	0.87[EUR][1000 genomes]
rs4488593	0.91[CEU][hapmap];0.84[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs4539738	0.82[EUR][1000 genomes]
rs4599046	1.00[CEU][hapmap];0.82[CHB][hapmap];0.94[EUR][1000 genomes]
rs4640322	0.87[EUR][1000 genomes]
rs7561282	0.82[CHB][hapmap];0.87[EUR][1000 genomes]
rs7585825	0.82[EUR][1000 genomes]
rs7586137	0.82[EUR][1000 genomes]
rs7589006	0.82[EUR][1000 genomes]
rs7595207	0.87[EUR][1000 genomes]
rs7595223	0.87[EUR][1000 genomes]
rs939591	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1000722	chr2:212272622-212465143	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv460069	chr2:212415948-212471642	Weak transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv584320	chr2:212415948-212471642	Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212419400-212451800	Weak transcription	Aorta	Aorta
2	chr2:212435400-212450000	Weak transcription	Fetal Heart	heart
3	chr2:212439400-212441000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr2:212439600-212440800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr2:212440000-212443200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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