The 2.0 version of rSNPBase

Variant report

Variant rs10198971
Chromosome Location chr2:10718699-10718700
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10698600-10736600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:10705800-10736000 Strong transcription Duodenum Mucosa Duodenum
3 chr2:10707400-10728800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:10708600-10718800 Strong transcription Primary T cells from cord blood blood
5 chr2:10708600-10719600 Strong transcription Primary T helper cells fromperipheralblood blood
6 chr2:10708600-10720000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr2:10708600-10727000 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr2:10708600-10732000 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr2:10708800-10720600 Strong transcription Fetal Intestine Large intestine
10 chr2:10708800-10732800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr2:10709000-10719000 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr2:10709000-10719000 Strong transcription Rectal Mucosa Donor 31 rectum
13 chr2:10709000-10719200 Strong transcription Primary T helper naive cells fromperipheralblood blood
14 chr2:10709000-10725800 Strong transcription Primary B cells from peripheral blood blood
15 chr2:10709000-10726600 Strong transcription Primary monocytes fromperipheralblood blood
16 chr2:10709200-10719200 Strong transcription Liver Liver
17 chr2:10709200-10719800 Strong transcription HepG2 liver
18 chr2:10709200-10746800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr2:10709400-10732600 Strong transcription Primary B cells from cord blood blood
20 chr2:10709600-10718800 Strong transcription Primary T cells fromperipheralblood blood
21 chr2:10709800-10719000 Strong transcription Placenta Placenta
22 chr2:10709800-10719600 Strong transcription Primary T helper cells PMA-I stimulated --
23 chr2:10710400-10720200 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr2:10710800-10721800 Weak transcription Fetal Heart heart
25 chr2:10711000-10719400 Strong transcription iPS-20b Cell Line embryonic stem cell
26 chr2:10712600-10720200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr2:10712600-10742000 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr2:10713200-10727800 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr2:10713800-10725600 Strong transcription K562 blood
30 chr2:10714200-10720000 Strong transcription Skeletal Muscle Female skeletal muscle
31 chr2:10714800-10719000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr2:10716400-10719000 Strong transcription Left Ventricle heart
33 chr2:10716400-10720000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr2:10716600-10719000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr2:10716800-10720200 Strong transcription A549 lung
36 chr2:10716800-10724400 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr2:10717000-10718800 Weak transcription NHEK skin
38 chr2:10717000-10719200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr2:10717000-10728800 Weak transcription Colonic Mucosa Colon
40 chr2:10717200-10719600 Strong transcription NH-A brain
41 chr2:10717400-10720000 Weak transcription Fetal Kidney kidney
42 chr2:10717600-10719400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr2:10717600-10719800 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr2:10717600-10721200 Weak transcription Brain Hippocampus Middle brain
45 chr2:10717600-10723800 Weak transcription NHDF-Ad bronchial
46 chr2:10717600-10724000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr2:10717600-10724200 Weak transcription Right Ventricle heart
48 chr2:10717600-10725600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr2:10717600-10732400 Weak transcription Fetal Brain Male brain
50 chr2:10717800-10719400 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015