The 2.0 version of rSNPBase

Variant report

Variant rs13009015
Chromosome Location chr2:10763118-10763119
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10725600-10793400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr2:10725800-10787000 Weak transcription Fetal Heart heart
3 chr2:10729400-10781800 Weak transcription Brain Inferior Temporal Lobe brain
4 chr2:10729400-10798400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:10730800-10774400 Weak transcription Psoas Muscle Psoas
6 chr2:10732000-10777600 Weak transcription Rectal Smooth Muscle rectum
7 chr2:10738400-10766600 Weak transcription Fetal Kidney kidney
8 chr2:10740200-10782000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:10742400-10773800 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr2:10742400-10774400 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr2:10742600-10772200 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr2:10742600-10791000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr2:10742800-10782400 Weak transcription Esophagus oesophagus
14 chr2:10744400-10777000 Weak transcription H9 Cell Line embryonic stem cell
15 chr2:10745200-10772400 Weak transcription Colon Smooth Muscle Colon
16 chr2:10746400-10764000 Weak transcription Primary hematopoietic stem cells blood
17 chr2:10746600-10777000 Weak transcription Colonic Mucosa Colon
18 chr2:10746600-10781800 Weak transcription Right Ventricle heart
19 chr2:10746800-10774000 Weak transcription Spleen Spleen
20 chr2:10746800-10774400 Weak transcription HSMMtube muscle
21 chr2:10746800-10781800 Weak transcription Pancreas Pancrea
22 chr2:10747000-10781800 Weak transcription Placenta Amnion Placenta Amnion
23 chr2:10749400-10774200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr2:10753600-10792800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:10754800-10796000 Weak transcription Small Intestine intestine
26 chr2:10755600-10772400 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr2:10756000-10767200 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr2:10756000-10772200 Weak transcription HMEC breast
29 chr2:10756200-10795800 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr2:10756200-10828400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr2:10757000-10764400 Strong transcription Breast Myoepithelial Primary Cells Breast
32 chr2:10757000-10765800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr2:10757000-10765800 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr2:10757600-10776600 Weak transcription Hela-S3 cervix
35 chr2:10757600-10777600 Weak transcription Brain Substantia Nigra brain
36 chr2:10757800-10774400 Weak transcription Brain Cingulate Gyrus brain
37 chr2:10758000-10782000 Weak transcription Brain Hippocampus Middle brain
38 chr2:10758200-10773000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr2:10758600-10763600 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr2:10758600-10773800 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr2:10758800-10765400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr2:10759200-10767200 Strong transcription Primary B cells from cord blood blood
43 chr2:10759600-10764400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr2:10759800-10767400 Strong transcription Liver Liver
45 chr2:10759800-10772600 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr2:10760000-10763800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr2:10760000-10764000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr2:10760200-10773000 Weak transcription Fetal Lung lung
49 chr2:10760600-10764400 Strong transcription Stomach Smooth Muscle stomach
50 chr2:10760600-10766400 Strong transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015