Variant report

Variant rs1020822
Chromosome Location chr3:53749734-53749735
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:53740200-53764400 Weak transcription Brain Cingulate Gyrus brain
2 chr3:53741200-53751400 Weak transcription Fetal Brain Female brain
3 chr3:53742600-53778000 Weak transcription Pancreas Pancrea
4 chr3:53744200-53753800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr3:53744200-53764600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr3:53744400-53749800 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr3:53744400-53756600 Weak transcription Lung lung
8 chr3:53744400-53758600 Weak transcription Stomach Smooth Muscle stomach
9 chr3:53744400-53763800 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr3:53744600-53755000 Weak transcription Brain Anterior Caudate brain
11 chr3:53744600-53755000 Weak transcription Brain Inferior Temporal Lobe brain
12 chr3:53744600-53756400 Weak transcription Liver Liver
13 chr3:53744600-53761200 Weak transcription Duodenum Mucosa Duodenum
14 chr3:53745000-53753800 Strong transcription Fetal Intestine Small intestine
15 chr3:53745200-53762800 Strong transcription Fetal Intestine Large intestine
16 chr3:53745600-53750200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr3:53747400-53751000 Weak transcription Primary B cells from peripheral blood blood
18 chr3:53748400-53752800 Weak transcription Spleen Spleen
19 chr3:53748600-53756200 Weak transcription Fetal Brain Male brain
20 chr3:53749200-53750000 Enhancers Right Atrium heart
21 chr3:53749200-53750600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr3:53749200-53750600 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr3:53749200-53751200 Enhancers NH-A brain
24 chr3:53749200-53752400 Strong transcription Fetal Lung lung
25 chr3:53749400-53749800 Enhancers Right Ventricle heart
26 chr3:53749400-53750000 Enhancers Left Ventricle heart
27 chr3:53749400-53750400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr3:53749400-53750400 Enhancers NHDF-Ad bronchial
29 chr3:53749600-53749800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr3:53749600-53750400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr3:53749600-53750600 Enhancers Osteobl bone

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