Variant report

Variant	rs10214814
Chromosome Location	chr6:69643521-69643522
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs28479811	1.00[AMR][1000 genomes]
rs7750654	1.00[AMR][1000 genomes]
rs7766812	1.00[AMR][1000 genomes]
rs7772760	1.00[AMR][1000 genomes]
rs9446066	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9446068	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9446069	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9454626	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9454633	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9454637	1.00[AMR][1000 genomes]
rs9454638	1.00[AMR][1000 genomes]
rs9454640	1.00[AMR][1000 genomes]
rs9454642	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9454657	1.00[AMR][1000 genomes]
rs9454660	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470831	chr6:69581991-69654650	Weak transcription Enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv886136	chr6:69598297-69654650	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69643200-69646800	Weak transcription	Cortex derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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