Variant report

Variant	rs9446069
Chromosome Location	chr6:69618924-69618925
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10214814	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28479811	1.00[AMR][1000 genomes]
rs7750654	1.00[AMR][1000 genomes]
rs7766812	1.00[AMR][1000 genomes]
rs7772760	1.00[AMR][1000 genomes]
rs9446066	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9446068	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9454626	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9454633	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9454637	1.00[AMR][1000 genomes]
rs9454638	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9454640	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9454642	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9454657	1.00[AMR][1000 genomes]
rs9454660	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470831	chr6:69581991-69654650	Weak transcription Enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv886136	chr6:69598297-69654650	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv525968	chr6:69618480-69638504	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69602800-69621000	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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