Variant report

Variant	rs10224392
Chromosome Location	chr7:136275094-136275095
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10226508	0.85[AFR][1000 genomes]
rs10228613	1.00[AFR][1000 genomes]
rs12669711	1.00[AFR][1000 genomes]
rs2081439	0.85[AFR][1000 genomes]
rs4257958	0.89[AFR][1000 genomes]
rs4634579	0.86[AFR][1000 genomes]
rs6947349	1.00[AFR][1000 genomes]
rs6955097	1.00[AFR][1000 genomes]
rs7788349	0.98[AFR][1000 genomes]
rs7808933	1.00[AFR][1000 genomes]
rs9691089	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518439	chr7:136134265-136452082	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136264000-136276400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:136273200-136275400	Weak transcription	Colon Smooth Muscle	Colon

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links