Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:108354711..108356531-chr7:108358919..108360858,2	K562	blood:
2	chr7:108355031..108357363-chr7:108358909..108360419,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10155811	1.00[EUR][1000 genomes]
rs10225181	1.00[EUR][1000 genomes]
rs10229154	1.00[EUR][1000 genomes]
rs10230997	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10238635	1.00[EUR][1000 genomes]
rs10241318	1.00[EUR][1000 genomes]
rs10255237	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10268467	1.00[EUR][1000 genomes]
rs10273105	1.00[EUR][1000 genomes]
rs10279331	1.00[EUR][1000 genomes]
rs10281086	1.00[EUR][1000 genomes]
rs1100228	1.00[EUR][1000 genomes]
rs16872645	1.00[EUR][1000 genomes]
rs28722885	1.00[EUR][1000 genomes]
rs6967977	1.00[EUR][1000 genomes]
rs6972924	1.00[EUR][1000 genomes]
rs7780568	1.00[EUR][1000 genomes]
rs848371	1.00[EUR][1000 genomes]
rs848372	1.00[EUR][1000 genomes]
rs848413	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817371	chr7:108199882-108649799	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	nsv1023651	chr7:108303048-108385180	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv1031096	chr7:108334543-108596014	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv888944	chr7:108348785-108433790	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv981780	chr7:108352758-108409711	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:108352200-108356800	Weak transcription	Fetal Stomach	stomach
2	chr7:108352200-108357000	Weak transcription	Dnd41	blood

Quick Search: