Variant report
| Variant | rs10239228 |
|---|---|
| Chromosome Location | chr7:38774217-38774218 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:38749000-38803600 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr7:38755000-38791200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 3 | chr7:38757000-38784200 | Weak transcription | HMEC | breast |
| 4 | chr7:38757200-38835400 | Weak transcription | Psoas Muscle | Psoas |
| 5 | chr7:38758600-38780600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 6 | chr7:38758800-38780000 | Weak transcription | Brain Substantia Nigra | brain |
| 7 | chr7:38759200-38810200 | Weak transcription | A549 | lung |
| 8 | chr7:38759400-38810600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 9 | chr7:38759600-38779600 | Weak transcription | Thymus | Thymus |
| 10 | chr7:38759600-38784200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 11 | chr7:38759800-38780600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 12 | chr7:38760000-38799800 | Weak transcription | HUVEC | blood vessel |
| 13 | chr7:38760600-38800200 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 14 | chr7:38761000-38820400 | Weak transcription | Stomach Mucosa | stomach |
| 15 | chr7:38761200-38785400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 16 | chr7:38762600-38793200 | Weak transcription | Hela-S3 | cervix |
| 17 | chr7:38763200-38828000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 18 | chr7:38763400-38780400 | Weak transcription | Fetal Kidney | kidney |
| 19 | chr7:38763400-38792600 | Weak transcription | Small Intestine | intestine |
| 20 | chr7:38763400-38828800 | Weak transcription | HepG2 | liver |
| 21 | chr7:38763800-38791600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 22 | chr7:38764400-38787600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 23 | chr7:38764800-38775000 | Weak transcription | Fetal Heart | heart |
| 24 | chr7:38764800-38775200 | Weak transcription | HSMMtube | muscle |
| 25 | chr7:38764800-38784200 | Weak transcription | NHEK | skin |
| 26 | chr7:38765400-38784200 | Weak transcription | NHLF | lung |
| 27 | chr7:38765400-38789600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 28 | chr7:38765400-38802800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 29 | chr7:38765600-38779600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 30 | chr7:38765600-38779600 | Weak transcription | Spleen | Spleen |
| 31 | chr7:38765600-38784200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 32 | chr7:38765600-38784400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 33 | chr7:38766000-38784200 | Weak transcription | NH-A | brain |
| 34 | chr7:38766000-38791800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 35 | chr7:38766200-38780000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 36 | chr7:38766200-38783400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 37 | chr7:38766600-38780600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 38 | chr7:38766600-38782600 | Weak transcription | Colon Smooth Muscle | Colon |
| 39 | chr7:38766600-38791600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 40 | chr7:38766800-38784200 | Weak transcription | NHDF-Ad | bronchial |
| 41 | chr7:38767000-38779200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 42 | chr7:38767200-38779800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 43 | chr7:38767200-38779800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 44 | chr7:38767200-38780200 | Weak transcription | Ovary | ovary |
| 45 | chr7:38767200-38780400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 46 | chr7:38767200-38792600 | Weak transcription | Colonic Mucosa | Colon |
| 47 | chr7:38767200-38802800 | Weak transcription | Right Ventricle | heart |
| 48 | chr7:38767200-38805800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 49 | chr7:38767400-38775000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 50 | chr7:38767400-38775200 | Weak transcription | Pancreas | Pancrea |
