Variant report

Variant rs10240479
Chromosome Location chr7:38221256-38221257
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38218400-38223400 Weak transcription Small Intestine intestine
2 chr7:38218400-38225000 Weak transcription Gastric stomach
3 chr7:38218600-38221600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr7:38218600-38222400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr7:38218600-38224000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr7:38218600-38226200 Weak transcription Placenta Amnion Placenta Amnion
7 chr7:38218600-38226600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr7:38218600-38259200 Weak transcription Colonic Mucosa Colon
9 chr7:38218800-38221600 Enhancers Primary monocytes fromperipheralblood blood
10 chr7:38218800-38223000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr7:38218800-38227400 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr7:38218800-38227800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr7:38218800-38227800 Weak transcription Fetal Muscle Trunk muscle
14 chr7:38219200-38225000 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr7:38219200-38225000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr7:38219200-38226200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr7:38219200-38226600 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr7:38219400-38224800 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr7:38219600-38221400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr7:38219600-38221400 Enhancers Brain Germinal Matrix brain
21 chr7:38219600-38222000 Weak transcription Primary T cells fromperipheralblood blood
22 chr7:38219600-38222200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr7:38219600-38225000 Weak transcription Primary B cells from peripheral blood blood
24 chr7:38219600-38225000 Weak transcription Right Atrium heart
25 chr7:38219600-38225600 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr7:38219600-38226200 Weak transcription H9 Cell Line embryonic stem cell
27 chr7:38219600-38241400 Weak transcription Fetal Intestine Large intestine
28 chr7:38219800-38221600 Enhancers Adipose Nuclei Adipose
29 chr7:38219800-38222200 Weak transcription Fetal Muscle Leg muscle
30 chr7:38219800-38223000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr7:38219800-38224600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr7:38219800-38225000 Weak transcription Pancreas Pancrea
33 chr7:38219800-38225400 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr7:38219800-38226200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr7:38219800-38227800 Weak transcription Lung lung
36 chr7:38219800-38234600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr7:38220000-38221400 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr7:38220000-38223400 Active TSS GM12878-XiMat blood
39 chr7:38220200-38221400 Weak transcription Brain Anterior Caudate brain
40 chr7:38220200-38221400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr7:38220200-38221400 Weak transcription Psoas Muscle Psoas
42 chr7:38220200-38221400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr7:38220200-38221400 Weak transcription Right Ventricle heart
44 chr7:38220200-38222800 Weak transcription Ovary ovary
45 chr7:38220200-38223800 Weak transcription Left Ventricle heart
46 chr7:38220200-38224800 Weak transcription Stomach Mucosa stomach
47 chr7:38220200-38225200 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr7:38220200-38225600 Weak transcription A549 lung
49 chr7:38220200-38226200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr7:38220200-38226200 Weak transcription NHEK skin

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