The 2.0 version of rSNPBase

Variant report

Variant rs10255474
Chromosome Location chr7:22165762-22165763
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:22149800-22177600 Weak transcription H1 Cell Line embryonic stem cell
2 chr7:22150000-22177800 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr7:22150200-22173200 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr7:22153000-22193000 Strong transcription Dnd41 blood
5 chr7:22154400-22169800 Weak transcription Fetal Muscle Trunk muscle
6 chr7:22155600-22178200 Weak transcription H9 Cell Line embryonic stem cell
7 chr7:22156000-22167600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr7:22156000-22181000 Weak transcription Gastric stomach
9 chr7:22156000-22186600 Weak transcription Brain Germinal Matrix brain
10 chr7:22156800-22186400 Strong transcription Liver Liver
11 chr7:22157800-22174600 Weak transcription Colonic Mucosa Colon
12 chr7:22158800-22166000 Strong transcription Rectal Mucosa Donor 31 rectum
13 chr7:22159000-22167400 Weak transcription HMEC breast
14 chr7:22159800-22172400 Weak transcription Fetal Stomach stomach
15 chr7:22159800-22175800 Weak transcription HSMMtube muscle
16 chr7:22159800-22214000 Weak transcription Small Intestine intestine
17 chr7:22160000-22173600 Strong transcription HepG2 liver
18 chr7:22160400-22183000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr7:22161200-22168600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr7:22161200-22169000 Enhancers HUVEC blood vessel
21 chr7:22161400-22166200 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr7:22161600-22169600 Weak transcription Aorta Aorta
23 chr7:22162000-22174800 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr7:22162200-22166200 Strong transcription Brain Anterior Caudate brain
25 chr7:22162200-22167600 Weak transcription Osteobl bone
26 chr7:22162200-22181400 Weak transcription Primary T cells from cord blood blood
27 chr7:22162200-22186600 Weak transcription GM12878-XiMat blood
28 chr7:22162200-22198000 Weak transcription Rectal Smooth Muscle rectum
29 chr7:22162400-22166000 Strong transcription Brain Hippocampus Middle brain
30 chr7:22162400-22177800 Weak transcription Fetal Muscle Leg muscle
31 chr7:22163000-22169400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr7:22163000-22179000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr7:22163000-22187800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr7:22163000-22190600 Strong transcription Fetal Thymus thymus
35 chr7:22163200-22167200 Strong transcription Brain Cingulate Gyrus brain
36 chr7:22163200-22167400 Weak transcription NHEK skin
37 chr7:22163200-22169200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr7:22163200-22169400 Weak transcription Spleen Spleen
39 chr7:22163200-22169600 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr7:22163200-22178800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr7:22163200-22181000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr7:22163200-22186800 Weak transcription Right Atrium heart
43 chr7:22163600-22167800 Weak transcription K562 blood
44 chr7:22163600-22179000 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr7:22164200-22169000 Strong transcription Brain Inferior Temporal Lobe brain
46 chr7:22164200-22173800 Strong transcription Duodenum Mucosa Duodenum
47 chr7:22164400-22166000 Strong transcription Brain Substantia Nigra brain
48 chr7:22164800-22166000 Genic enhancers Left Ventricle heart
49 chr7:22164800-22166000 Strong transcription Pancreas Pancrea
50 chr7:22164800-22166200 Enhancers Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015