Variant report

Variant	rs10261133
Chromosome Location	chr7:138438464-138438465
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:138435732..138438483-chr7:138440071..138441588,2	K562	blood:
2	chr7:138435923..138438483-chr7:138439834..138443194,4	K562	blood:

Variant related genes	Relation type
ENSG00000105929	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs9692528	1.00[GIH][hapmap];1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030956	chr7:138163169-138579519	Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:53 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:138400600-138439000	Weak transcription	Right Atrium	heart
2	chr7:138429800-138440600	Enhancers	Fetal Thymus	thymus
3	chr7:138433800-138439000	Enhancers	Primary T helper cells fromperipheralblood	blood
4	chr7:138435000-138439000	Enhancers	Primary T cells fromperipheralblood	blood
5	chr7:138435800-138439000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr7:138435800-138440200	Weak transcription	Fetal Intestine Large	intestine
7	chr7:138436000-138438800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr7:138436000-138438800	Enhancers	Primary T killer memory cells from peripheral blood	blood
9	chr7:138436000-138439000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
10	chr7:138436000-138439800	Weak transcription	Fetal Lung	lung
11	chr7:138436000-138440000	Weak transcription	Fetal Intestine Small	intestine
12	chr7:138436000-138440200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr7:138436200-138439200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr7:138436400-138439200	Enhancers	Thymus	Thymus
15	chr7:138436600-138438800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
16	chr7:138436800-138438800	Enhancers	Placenta	Placenta
17	chr7:138437200-138438800	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr7:138437400-138438600	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr7:138437400-138438800	Enhancers	HUES6 Cell Line	embryonic stem cell
20	chr7:138437400-138438800	Enhancers	HUES64 Cell Line	embryonic stem cell
21	chr7:138437400-138438800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr7:138437400-138438800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr7:138437400-138439800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr7:138437600-138440000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr7:138437600-138440000	Weak transcription	HMEC	breast
26	chr7:138437800-138438600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
27	chr7:138437800-138438800	Enhancers	iPS-15b Cell Line	embryonic stem cell
28	chr7:138437800-138438800	Enhancers	Hela-S3	cervix
29	chr7:138437800-138439800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr7:138437800-138440200	Weak transcription	Brain Hippocampus Middle	brain
31	chr7:138438000-138438800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
32	chr7:138438000-138439000	Enhancers	Primary T helper cells PMA-I stimulated	--
33	chr7:138438000-138439800	Weak transcription	H9 Cell Line	embryonic stem cell
34	chr7:138438000-138440000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
35	chr7:138438000-138440600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
36	chr7:138438200-138438600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
37	chr7:138438200-138438600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
38	chr7:138438200-138438800	Enhancers	Primary T cells from cord blood	blood
39	chr7:138438200-138438800	Enhancers	Primary T helper naive cells from peripheral blood	blood
40	chr7:138438200-138438800	Enhancers	Dnd41	blood
41	chr7:138438200-138439000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
42	chr7:138438200-138439200	Enhancers	HepG2	liver
43	chr7:138438200-138439600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr7:138438200-138439800	Weak transcription	H1 Cell Line	embryonic stem cell
45	chr7:138438200-138439800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr7:138438200-138439800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr7:138438200-138440000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr7:138438200-138440000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
49	chr7:138438200-138440000	Weak transcription	Brain Inferior Temporal Lobe	brain
50	chr7:138438200-138440200	Weak transcription	Fetal Muscle Leg	muscle

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