Variant report

Variant	rs10261211
Chromosome Location	chr7:137486520-137486521
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10215013	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10216067	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10243295	1.00[TSI][hapmap]
rs10269220	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10279889	1.00[TSI][hapmap]
rs10281950	1.00[TSI][hapmap]
rs13438752	1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1871214	1.00[TSI][hapmap]
rs3735019	1.00[TSI][hapmap]
rs6467716	1.00[TSI][hapmap]
rs6958842	1.00[TSI][hapmap]
rs6960308	1.00[TSI][hapmap]
rs6960313	1.00[TSI][hapmap]
rs6980335	1.00[TSI][hapmap]
rs7788967	1.00[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137459400-137490000	Weak transcription	Aorta	Aorta
2	chr7:137485400-137486600	Enhancers	Muscle Satellite Cultured Cells	--
3	chr7:137485400-137486600	Enhancers	HUVEC	blood vessel
4	chr7:137485400-137487000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr7:137485400-137490000	Weak transcription	HSMM	muscle
6	chr7:137485600-137486600	Enhancers	Osteobl	bone
7	chr7:137485600-137486800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr7:137485800-137486600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr7:137485800-137486600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr7:137486000-137501800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr7:137486200-137486600	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr7:137486400-137486600	Enhancers	HSMMtube	muscle
13	chr7:137486400-137489400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr7:137486400-137489800	Weak transcription	NH-A	brain
15	chr7:137486400-137490400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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