Variant report

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1002731	0.87[AFR][1000 genomes]
rs1002732	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1002733	0.89[AFR][1000 genomes]
rs10244629	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10266753	0.91[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs10268304	0.86[AFR][1000 genomes]
rs10271414	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10272163	0.89[AFR][1000 genomes]
rs10273467	0.84[ASN][1000 genomes]
rs10277269	0.89[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs1615456	0.83[AFR][1000 genomes]
rs1636477	0.83[AFR][1000 genomes]
rs1636479	0.89[AFR][1000 genomes]
rs1636480	0.87[AFR][1000 genomes]
rs1636481	0.87[AFR][1000 genomes]
rs17520733	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1796057	0.89[AFR][1000 genomes]
rs1796083	0.83[AFR][1000 genomes]
rs1796084	0.81[AFR][1000 genomes]
rs1796087	0.83[AFR][1000 genomes]
rs1796088	0.83[AFR][1000 genomes]
rs2158733	0.86[AFR][1000 genomes]
rs2707419	0.88[AFR][1000 genomes]
rs2707420	0.89[AFR][1000 genomes]
rs2707421	0.89[AFR][1000 genomes]
rs3973935	0.81[EUR][1000 genomes]
rs3973936	0.81[EUR][1000 genomes]
rs3973937	0.85[AFR][1000 genomes]
rs4398791	0.89[AFR][1000 genomes]
rs4717584	0.83[AFR][1000 genomes]
rs4719082	0.89[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs4719083	0.89[AFR][1000 genomes]
rs4719088	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4719089	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4719090	0.83[AFR][1000 genomes]
rs6460643	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1034662	chr7:70275712-70722953	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1015261	chr7:70404302-71255933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70612200-70650600	Weak transcription	Fetal Lung	lung
2	chr7:70619800-70641800	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr7:70631200-70641200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr7:70631200-70641600	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr7:70631600-70641800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr7:70631800-70647200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr7:70633000-70641000	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr7:70638400-70643200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr7:70639400-70641000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr7:70639400-70641000	Weak transcription	Right Ventricle	heart
11	chr7:70639600-70641000	Weak transcription	Left Ventricle	heart

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