Variant report
| Variant | rs10282325 |
|---|---|
| Chromosome Location | chr7:14412633-14412634 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:10)
| rs_ID | r2[population] |
|---|---|
| rs10247193 | 1.00[TSI][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4721317 | 1.00[ASN][1000 genomes] |
| rs62444572 | 0.86[EUR][1000 genomes] |
| rs62444579 | 1.00[ASN][1000 genomes] |
| rs62444595 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs62444597 | 0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs62444599 | 0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs62444600 | 0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs62445620 | 1.00[ASN][1000 genomes] |
| rs73052171 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv949033 | chr7:14086106-14860323 | Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
| 2 | nsv606281 | chr7:14388381-14443963 | Weak transcription Flanking Active TSS Enhancers Active TSS | n/a | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
