Variant report

Variant	rs1028253
Chromosome Location	chr8:91451906-91451907
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91450734..91452943-chr8:91454626..91457372,2	K562	blood:
2	chr8:91447413..91449635-chr8:91451507..91453812,2	K562	blood:

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10091653	0.81[ASN][1000 genomes]
rs10104773	0.82[ASN][1000 genomes]
rs10216547	0.82[ASN][1000 genomes]
rs1028252	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10481088	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10956639	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10956649	0.83[ASN][1000 genomes]
rs11778003	0.82[ASN][1000 genomes]
rs11783777	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11786139	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11993968	0.82[ASN][1000 genomes]
rs11998437	0.82[ASN][1000 genomes]
rs13250247	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13259963	0.81[EUR][1000 genomes]
rs13260448	0.83[ASN][1000 genomes]
rs1983531	0.86[ASN][1000 genomes]
rs2091901	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2103442	0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2103443	0.82[ASN][1000 genomes]
rs2103445	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2142144	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2178858	0.81[ASN][1000 genomes]
rs2205156	0.96[ASN][1000 genomes]
rs2339147	0.81[ASN][1000 genomes]
rs2339148	0.80[ASN][1000 genomes]
rs2339149	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2339150	0.81[ASN][1000 genomes]
rs2339151	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2339152	0.81[ASN][1000 genomes]
rs28771235	0.81[ASN][1000 genomes]
rs28775309	0.81[ASN][1000 genomes]
rs34309716	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34359428	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35349778	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs36016622	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs36022382	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4301407	0.97[ASN][1000 genomes]
rs4345614	0.82[ASN][1000 genomes]
rs4346959	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4412335	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs4443622	0.83[ASN][1000 genomes]
rs4621769	0.81[ASN][1000 genomes]
rs4734148	0.81[ASN][1000 genomes]
rs4734928	0.81[ASN][1000 genomes]
rs4734968	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4734969	0.81[ASN][1000 genomes]
rs4734986	0.82[ASN][1000 genomes]
rs7010132	0.97[ASN][1000 genomes]
rs7015821	0.82[ASN][1000 genomes]
rs7816110	0.82[ASN][1000 genomes]
rs7820382	0.80[ASN][1000 genomes]
rs7845025	0.99[ASN][1000 genomes]
rs909191	0.81[ASN][1000 genomes]
rs926094	0.82[ASN][1000 genomes]
rs9297851	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9643275	0.80[ASN][1000 genomes]
rs9643277	0.82[ASN][1000 genomes]
rs9918885	0.81[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91451200-91453000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr8:91451800-91453800	Enhancers	NHDF-Ad	bronchial

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links