Variant report

Variant rs10406397
Chromosome Location chr19:20827750-20827751
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20814600-20842200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr19:20815000-20843400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr19:20815200-20843200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:20816200-20828200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:20816200-20831000 ZNF genes & repeats Liver Liver
6 chr19:20816200-20843000 ZNF genes & repeats Primary hematopoietic stem cells blood
7 chr19:20816400-20842600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
8 chr19:20821000-20842400 Weak transcription K562 blood
9 chr19:20822400-20828600 Strong transcription Osteobl bone
10 chr19:20822600-20840000 Weak transcription Psoas Muscle Psoas
11 chr19:20822600-20842200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr19:20822600-20842800 Weak transcription HSMMtube muscle
13 chr19:20823600-20828600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
14 chr19:20823600-20843200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr19:20824800-20832800 ZNF genes & repeats Fetal Brain Female brain
16 chr19:20825400-20828400 Strong transcription H1 Cell Line embryonic stem cell
17 chr19:20825400-20839400 Weak transcription Brain Anterior Caudate brain
18 chr19:20825600-20828600 Strong transcription Fetal Adrenal Gland Adrenal Gland
19 chr19:20825600-20832400 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr19:20825600-20840800 Weak transcription Muscle Satellite Cultured Cells --
21 chr19:20826400-20828600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr19:20826400-20828600 ZNF genes & repeats Fetal Muscle Leg muscle
23 chr19:20826800-20828600 Strong transcription Stomach Smooth Muscle stomach
24 chr19:20826800-20829600 Weak transcription Primary T cells fromperipheralblood blood
25 chr19:20826800-20832600 Weak transcription Stomach Mucosa stomach
26 chr19:20827000-20828200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr19:20827000-20828400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr19:20827000-20828600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr19:20827000-20828600 Strong transcription Fetal Kidney kidney
30 chr19:20827000-20829400 Strong transcription Cortex derived primary cultured neurospheres brain
31 chr19:20827000-20831800 Weak transcription NHDF-Ad bronchial
32 chr19:20827000-20838400 Weak transcription Rectal Smooth Muscle rectum
33 chr19:20827000-20840800 Weak transcription Brain Cingulate Gyrus brain
34 chr19:20827000-20841000 Weak transcription Brain Inferior Temporal Lobe brain
35 chr19:20827000-20841400 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr19:20827000-20842400 Weak transcription Placenta Amnion Placenta Amnion
37 chr19:20827000-20842800 Weak transcription Gastric stomach
38 chr19:20827200-20828000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr19:20827200-20828000 Weak transcription Brain Hippocampus Middle brain
40 chr19:20827200-20828200 Weak transcription Aorta Aorta
41 chr19:20827200-20828400 Weak transcription Fetal Brain Male brain
42 chr19:20827200-20828600 Strong transcription Primary T helper cells fromperipheralblood blood
43 chr19:20827200-20829600 Strong transcription HUES48 Cell Line embryonic stem cell
44 chr19:20827200-20829600 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr19:20827200-20829800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr19:20827200-20829800 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr19:20827200-20829800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr19:20827200-20829800 Weak transcription Thymus Thymus
49 chr19:20827200-20830400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr19:20827200-20830600 Weak transcription Lung lung

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