Variant report

Variant rs10417985
Chromosome Location chr19:42377133-42377134
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:42366400-42377600 Strong transcription Fetal Brain Female brain
2 chr19:42367200-42377200 Strong transcription Brain Inferior Temporal Lobe brain
3 chr19:42367600-42379200 Weak transcription Fetal Brain Male brain
4 chr19:42368800-42377400 Strong transcription Brain Germinal Matrix brain
5 chr19:42369200-42377200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr19:42369400-42377600 Genic enhancers Fetal Thymus thymus
7 chr19:42369600-42377400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr19:42369600-42386400 Weak transcription Fetal Kidney kidney
9 chr19:42370400-42377600 Strong transcription Cortex derived primary cultured neurospheres brain
10 chr19:42372200-42377200 Strong transcription Brain Angular Gyrus brain
11 chr19:42372200-42377400 Strong transcription Stomach Smooth Muscle stomach
12 chr19:42372600-42377600 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr19:42372600-42377800 Genic enhancers Spleen Spleen
14 chr19:42373800-42381400 Enhancers Primary hematopoietic stem cells blood
15 chr19:42374000-42378200 Weak transcription Ovary ovary
16 chr19:42374400-42377200 Genic enhancers Thymus Thymus
17 chr19:42374600-42377600 Strong transcription Osteobl bone
18 chr19:42374600-42379800 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr19:42374600-42386600 Weak transcription Right Atrium heart
20 chr19:42374800-42377200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr19:42374800-42377400 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr19:42374800-42378400 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr19:42374800-42379600 Weak transcription K562 blood
24 chr19:42374800-42380600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr19:42374800-42381400 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr19:42374800-42381400 Enhancers Primary T cells fromperipheralblood blood
27 chr19:42374800-42381400 Weak transcription Rectal Smooth Muscle rectum
28 chr19:42374800-42381400 Weak transcription Small Intestine intestine
29 chr19:42374800-42381800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr19:42375000-42377200 Strong transcription Fetal Intestine Small intestine
31 chr19:42375000-42377400 Genic enhancers Fetal Muscle Leg muscle
32 chr19:42375000-42381200 Enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr19:42375200-42377200 Genic enhancers Placenta Placenta
34 chr19:42375400-42380200 Enhancers Primary monocytes fromperipheralblood blood
35 chr19:42375400-42386200 Weak transcription Hela-S3 cervix
36 chr19:42376000-42381000 Weak transcription HepG2 liver
37 chr19:42376000-42386400 Weak transcription Brain Anterior Caudate brain
38 chr19:42376000-42386400 Weak transcription Fetal Lung lung
39 chr19:42376000-42386600 Weak transcription HSMMtube muscle
40 chr19:42376200-42377400 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr19:42376200-42377400 Genic enhancers Pancreas Pancrea
42 chr19:42376200-42377600 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr19:42376200-42377600 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr19:42376200-42377800 Enhancers Rectal Mucosa Donor 29 rectum
45 chr19:42376200-42378800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr19:42376200-42379000 Weak transcription Aorta Aorta
47 chr19:42376200-42379400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr19:42376200-42379400 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr19:42376200-42379400 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr19:42376200-42380200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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