The 2.0 version of rSNPBase

Variant report

Variant rs10418666
Chromosome Location chr19:52733515-52733516
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52703000-52734600 Strong transcription Fetal Stomach stomach
2 chr19:52703200-52734000 Strong transcription Lung lung
3 chr19:52705000-52735200 Strong transcription Stomach Smooth Muscle stomach
4 chr19:52718000-52734200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr19:52719000-52735400 ZNF genes & repeats A549 lung
6 chr19:52723600-52735200 Strong transcription Fetal Muscle Leg muscle
7 chr19:52727600-52737800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr19:52730200-52734400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr19:52730200-52737800 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr19:52730400-52734000 Weak transcription Small Intestine intestine
11 chr19:52730800-52741000 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr19:52731000-52736800 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr19:52731000-52736800 Weak transcription Stomach Mucosa stomach
14 chr19:52731200-52734400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr19:52731600-52734600 Weak transcription Aorta Aorta
16 chr19:52731600-52736400 Weak transcription Fetal Heart heart
17 chr19:52731600-52738000 Weak transcription Fetal Brain Male brain
18 chr19:52731600-52741000 Weak transcription Colon Smooth Muscle Colon
19 chr19:52731800-52735400 Weak transcription Primary B cells from peripheral blood blood
20 chr19:52731800-52736600 Weak transcription HUVEC blood vessel
21 chr19:52732000-52733600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr19:52732000-52734400 Weak transcription NHDF-Ad bronchial
23 chr19:52732000-52736000 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr19:52732000-52736000 Weak transcription Psoas Muscle Psoas
25 chr19:52732000-52736600 Weak transcription Primary hematopoietic stem cells blood
26 chr19:52732000-52740600 Weak transcription Rectal Smooth Muscle rectum
27 chr19:52732000-52740800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr19:52732200-52733800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr19:52732200-52733800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr19:52732200-52733800 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr19:52732200-52733800 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr19:52732200-52733800 Weak transcription NHEK skin
33 chr19:52732200-52734000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr19:52732200-52734000 Weak transcription NH-A brain
35 chr19:52732200-52734200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr19:52732200-52734400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr19:52732200-52734400 Weak transcription Brain Hippocampus Middle brain
38 chr19:52732200-52734600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr19:52732200-52735600 Weak transcription H1 Cell Line embryonic stem cell
40 chr19:52732200-52736000 Weak transcription Ovary ovary
41 chr19:52732200-52736000 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr19:52732200-52736200 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr19:52732200-52736400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr19:52732200-52741000 Weak transcription Dnd41 blood
45 chr19:52732200-52741200 Weak transcription Fetal Lung lung
46 chr19:52732400-52733800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr19:52732400-52733800 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr19:52732400-52734000 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr19:52732400-52734000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr19:52732400-52734000 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015