The 2.0 version of rSNPBase

Variant report

Variant rs55751302
Chromosome Location chr19:52740499-52740500
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52730800-52741000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr19:52731600-52741000 Weak transcription Colon Smooth Muscle Colon
3 chr19:52732000-52740600 Weak transcription Rectal Smooth Muscle rectum
4 chr19:52732000-52740800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr19:52732200-52741000 Weak transcription Dnd41 blood
6 chr19:52732200-52741200 Weak transcription Fetal Lung lung
7 chr19:52732400-52740600 Weak transcription Brain Angular Gyrus brain
8 chr19:52732400-52741000 Weak transcription Muscle Satellite Cultured Cells --
9 chr19:52732400-52741200 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr19:52733200-52742800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr19:52733200-52759600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr19:52733400-52741200 Weak transcription Fetal Muscle Trunk muscle
13 chr19:52734200-52741000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr19:52734400-52751600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr19:52734600-52740800 Weak transcription Fetal Stomach stomach
16 chr19:52734600-52743800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr19:52735200-52740600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr19:52735200-52741200 Weak transcription Fetal Muscle Leg muscle
19 chr19:52740400-52741200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015