Variant report

Variant rs10420381
Chromosome Location chr19:20237290-20237291
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20207600-20240400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:20207600-20240600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:20207600-20241200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:20209400-20239000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr19:20211400-20238800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
6 chr19:20215200-20240400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
7 chr19:20217000-20238400 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
8 chr19:20222600-20238800 ZNF genes & repeats Fetal Lung lung
9 chr19:20226600-20238800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr19:20232000-20237600 ZNF genes & repeats Fetal Brain Female brain
11 chr19:20232000-20238400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
12 chr19:20233000-20242600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr19:20233600-20240600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
14 chr19:20234200-20240400 Strong transcription HUES48 Cell Line embryonic stem cell
15 chr19:20234400-20238600 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr19:20234400-20245000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr19:20234800-20241200 Strong transcription HUES64 Cell Line embryonic stem cell
18 chr19:20235000-20238600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr19:20235200-20238800 ZNF genes & repeats Adipose Nuclei Adipose
20 chr19:20235400-20240600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr19:20235600-20237800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
22 chr19:20235600-20237800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr19:20235600-20238800 ZNF genes & repeats Ovary ovary
24 chr19:20235600-20240600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
25 chr19:20235800-20237400 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr19:20235800-20237600 ZNF genes & repeats Brain Germinal Matrix brain
27 chr19:20235800-20237800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
28 chr19:20235800-20237800 ZNF genes & repeats Fetal Stomach stomach
29 chr19:20235800-20238000 ZNF genes & repeats Fetal Intestine Small intestine
30 chr19:20235800-20238800 ZNF genes & repeats Primary B cells from peripheral blood blood
31 chr19:20236000-20237600 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
32 chr19:20236000-20238200 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr19:20236000-20242400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr19:20236200-20237400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr19:20236200-20238800 Strong transcription H1 Cell Line embryonic stem cell
36 chr19:20236200-20240400 ZNF genes & repeats Primary hematopoietic stem cells blood
37 chr19:20236400-20237800 Strong transcription H9 Cell Line embryonic stem cell
38 chr19:20236400-20238800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
39 chr19:20236600-20238600 Weak transcription Brain Hippocampus Middle brain
40 chr19:20236600-20239800 Weak transcription Stomach Smooth Muscle stomach
41 chr19:20236800-20242600 ZNF genes & repeats Fetal Intestine Large intestine
42 chr19:20237200-20237600 Active TSS Brain Angular Gyrus brain
43 chr19:20237200-20237800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr19:20237200-20239800 Weak transcription Pancreas Pancrea
45 chr19:20237200-20240000 Strong transcription Cortex derived primary cultured neurospheres brain
46 chr19:20237200-20240200 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr19:20237200-20243400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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