Variant report

Variant rs10422996
Chromosome Location chr19:39841733-39841734
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39834000-39842400 Weak transcription Gastric stomach
2 chr19:39834200-39846600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:39834200-39859200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr19:39834400-39841800 Weak transcription Lung lung
5 chr19:39834400-39842000 Weak transcription H1 Cell Line embryonic stem cell
6 chr19:39834400-39842000 Weak transcription H9 Cell Line embryonic stem cell
7 chr19:39834400-39842000 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr19:39834400-39842200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:39834400-39842200 Weak transcription Esophagus oesophagus
10 chr19:39834400-39842400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr19:39834400-39844600 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr19:39834400-39845400 Weak transcription Fetal Kidney kidney
13 chr19:39834400-39849200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr19:39834600-39842400 Weak transcription Colonic Mucosa Colon
15 chr19:39834600-39842400 Weak transcription HMEC breast
16 chr19:39834800-39842400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr19:39834800-39847400 Weak transcription Small Intestine intestine
18 chr19:39834800-39852800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr19:39834800-39852800 Strong transcription Fetal Muscle Trunk muscle
20 chr19:39834800-39880000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr19:39835000-39844600 Weak transcription Stomach Mucosa stomach
22 chr19:39835000-39846000 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr19:39835600-39853600 Strong transcription Placenta Placenta
24 chr19:39835800-39880200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr19:39835800-39880200 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr19:39836000-39847600 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr19:39836200-39842400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr19:39836200-39842800 Weak transcription Placenta Amnion Placenta Amnion
29 chr19:39836200-39880400 Strong transcription Primary T cells from cord blood blood
30 chr19:39836400-39862600 Strong transcription Duodenum Mucosa Duodenum
31 chr19:39836600-39845600 Weak transcription Aorta Aorta
32 chr19:39836600-39845800 Weak transcription Rectal Smooth Muscle rectum
33 chr19:39836600-39864000 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr19:39836600-39880400 Strong transcription Primary monocytes fromperipheralblood blood
35 chr19:39836600-39880400 Strong transcription Fetal Brain Female brain
36 chr19:39836800-39842200 Weak transcription Colon Smooth Muscle Colon
37 chr19:39836800-39846000 Weak transcription Pancreas Pancrea
38 chr19:39836800-39852000 Strong transcription HUES64 Cell Line embryonic stem cell
39 chr19:39836800-39852600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr19:39837000-39841800 Strong transcription Fetal Muscle Leg muscle
41 chr19:39837000-39841800 Weak transcription Psoas Muscle Psoas
42 chr19:39837200-39842200 Strong transcription Stomach Smooth Muscle stomach
43 chr19:39837200-39842600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr19:39837400-39842400 Enhancers Brain Cingulate Gyrus brain
45 chr19:39837400-39842400 Weak transcription Fetal Brain Male brain
46 chr19:39837400-39846400 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr19:39837400-39880000 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr19:39837600-39863600 Strong transcription Fetal Intestine Small intestine
49 chr19:39837800-39854400 Strong transcription Fetal Stomach stomach
50 chr19:39837800-39855400 Strong transcription Sigmoid Colon Sigmoid Colon

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