The 2.0 version of rSNPBase

Variant report

Variant rs10429966
Chromosome Location chr1:214457681-214457682
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214455400-214463200 Weak transcription Lung lung
2 chr1:214455600-214487800 Weak transcription Primary B cells from cord blood blood
3 chr1:214455600-214489000 Weak transcription Ovary ovary
4 chr1:214455800-214463200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr1:214456000-214458400 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:214456000-214458400 Weak transcription Fetal Intestine Large intestine
7 chr1:214456000-214458800 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr1:214456000-214469200 Weak transcription NH-A brain
9 chr1:214456200-214457800 Enhancers Primary T helper cells fromperipheralblood blood
10 chr1:214456200-214458200 Weak transcription A549 lung
11 chr1:214456200-214458400 Weak transcription Duodenum Mucosa Duodenum
12 chr1:214456200-214459000 Weak transcription Gastric stomach
13 chr1:214456200-214459200 Enhancers Primary T helper cells PMA-I stimulated --
14 chr1:214456200-214462400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:214456200-214463000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:214456200-214463800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:214456200-214469800 Weak transcription Fetal Lung lung
18 chr1:214456400-214458200 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr1:214456400-214458400 Weak transcription Fetal Intestine Small intestine
20 chr1:214456400-214458400 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:214456400-214459400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:214456400-214463000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:214456400-214463000 Weak transcription Psoas Muscle Psoas
24 chr1:214456400-214463000 Weak transcription Right Atrium heart
25 chr1:214456400-214468800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:214456400-214470000 Weak transcription Placenta Amnion Placenta Amnion
27 chr1:214456400-214491800 Weak transcription Pancreas Pancrea
28 chr1:214456600-214457800 Weak transcription Liver Liver
29 chr1:214456600-214458200 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr1:214456600-214458400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:214456600-214459000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:214456600-214459000 Weak transcription Thymus Thymus
33 chr1:214456600-214459200 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr1:214456600-214460800 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr1:214456600-214461200 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr1:214456600-214461200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr1:214456600-214463000 Weak transcription Fetal Muscle Leg muscle
38 chr1:214456600-214463000 Weak transcription Left Ventricle heart
39 chr1:214456600-214467800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:214456600-214483200 Weak transcription Primary B cells from peripheral blood blood
41 chr1:214456800-214458200 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:214456800-214458200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr1:214456800-214458200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:214456800-214458200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:214456800-214458200 Weak transcription K562 blood
46 chr1:214456800-214458400 Weak transcription Primary T cells from cord blood blood
47 chr1:214456800-214458600 Weak transcription GM12878-XiMat blood
48 chr1:214456800-214458600 Weak transcription NHEK skin
49 chr1:214456800-214461200 Weak transcription Primary T cells fromperipheralblood blood
50 chr1:214456800-214461400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015