Variant report

Variant rs1043327
Chromosome Location chr19:18554972-18554973
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:18545200-18570000 Weak transcription Small Intestine intestine
2 chr19:18549200-18559600 Weak transcription HSMM muscle
3 chr19:18549200-18566200 Weak transcription HUVEC blood vessel
4 chr19:18549400-18556400 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr19:18549800-18567000 Weak transcription Psoas Muscle Psoas
6 chr19:18550200-18559600 Weak transcription Primary hematopoietic stem cells blood
7 chr19:18550400-18557200 Weak transcription Fetal Lung lung
8 chr19:18550600-18562000 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr19:18550800-18557000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr19:18550800-18569800 Weak transcription Right Atrium heart
11 chr19:18551000-18556600 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr19:18551000-18561200 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr19:18551200-18555400 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr19:18551400-18557000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:18551600-18556600 Weak transcription H1 Cell Line embryonic stem cell
16 chr19:18551600-18561600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr19:18551600-18570600 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr19:18551800-18556600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr19:18551800-18561600 Strong transcription Stomach Smooth Muscle stomach
20 chr19:18551800-18561800 Strong transcription Fetal Stomach stomach
21 chr19:18552800-18562000 Strong transcription NHLF lung
22 chr19:18553200-18556400 Strong transcription Colonic Mucosa Colon
23 chr19:18553200-18558000 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr19:18553400-18555000 Weak transcription HepG2 liver
25 chr19:18553400-18556000 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
26 chr19:18553400-18556800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr19:18553400-18556800 Strong transcription Spleen Spleen
28 chr19:18553400-18559000 Weak transcription H9 Cell Line embryonic stem cell
29 chr19:18553400-18560800 Strong transcription Skeletal Muscle Female skeletal muscle
30 chr19:18553400-18563600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr19:18553400-18564200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr19:18553400-18564800 Strong transcription Lung lung
33 chr19:18553400-18579000 Weak transcription Fetal Kidney kidney
34 chr19:18553600-18555000 Strong transcription Fetal Intestine Small intestine
35 chr19:18553600-18555200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr19:18553600-18555800 Strong transcription Fetal Intestine Large intestine
37 chr19:18553600-18555800 Strong transcription Hela-S3 cervix
38 chr19:18553600-18556400 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr19:18553600-18562000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr19:18553600-18564200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr19:18553600-18564200 Strong transcription NHEK skin
42 chr19:18553600-18565000 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr19:18553800-18556400 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr19:18553800-18556800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr19:18553800-18557400 Strong transcription Liver Liver
46 chr19:18553800-18557600 Strong transcription Left Ventricle heart
47 chr19:18553800-18557600 Strong transcription Right Ventricle heart
48 chr19:18553800-18557800 Strong transcription Placenta Amnion Placenta Amnion
49 chr19:18553800-18561400 Strong transcription Gastric stomach
50 chr19:18553800-18561600 Strong transcription Primary B cells from peripheral blood blood

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