Variant report

Variant	rs10441492
Chromosome Location	chr8:108516599-108516600
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:108516351..108518369-chr8:108521717..108523798,2	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10099510	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10101315	0.88[AFR][1000 genomes]
rs10102033	1.00[AMR][1000 genomes]
rs10216781	1.00[AMR][1000 genomes]
rs10441491	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16876344	1.00[AMR][1000 genomes]
rs28477973	1.00[AMR][1000 genomes]
rs28521936	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28525390	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28752126	0.88[AFR][1000 genomes]
rs7814715	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7839020	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1825455	chr8:108504907-108518274	Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:108511800-108518600	Weak transcription	Fetal Kidney	kidney
2	chr8:108512200-108517400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr8:108512200-108518600	Weak transcription	Colon Smooth Muscle	Colon
4	chr8:108512200-108520200	Weak transcription	Psoas Muscle	Psoas
5	chr8:108512400-108521200	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr8:108513600-108517400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr8:108513800-108516600	Weak transcription	HUVEC	blood vessel
8	chr8:108514000-108517200	Weak transcription	NHDF-Ad	bronchial
9	chr8:108515200-108516800	Enhancers	Ovary	ovary
10	chr8:108515400-108517800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr8:108515400-108518200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr8:108515600-108518000	Enhancers	Osteobl	bone
13	chr8:108515800-108518600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr8:108516000-108516600	Enhancers	Aorta	Aorta
15	chr8:108516000-108517800	Enhancers	Primary hematopoietic stem cells short term culture	blood
16	chr8:108516000-108519000	Enhancers	NH-A	brain
17	chr8:108516000-108519200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr8:108516200-108517600	Enhancers	Primary hematopoietic stem cells	blood
19	chr8:108516200-108518800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr8:108516400-108518800	Enhancers	Muscle Satellite Cultured Cells	--
21	chr8:108516400-108519000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr8:108516400-108519000	Enhancers	HSMM	muscle

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