Variant report

Variant	rs10450827
Chromosome Location	chr13:53819165-53819166
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1322945	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55915021	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57096690	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs58598010	0.94[AFR][1000 genomes]
rs60279434	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7334904	0.86[AFR][1000 genomes]
rs7335176	0.87[AFR][1000 genomes]
rs73483518	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73483533	0.90[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs73483536	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs73483541	0.90[AFR][1000 genomes]
rs73483552	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs73483556	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74086926	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs74086930	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050969	chr13:53665927-54064861	Bivalent Enhancer Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:53816400-53820000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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