The 2.0 version of rSNPBase

Variant report

Variant rs1045596
Chromosome Location chr2:10711987-10711988
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10698600-10736600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:10699400-10716200 Weak transcription Fetal Brain Male brain
3 chr2:10702000-10715800 Weak transcription Hela-S3 cervix
4 chr2:10702000-10717400 Weak transcription Psoas Muscle Psoas
5 chr2:10702200-10713800 Weak transcription K562 blood
6 chr2:10705000-10712400 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr2:10705800-10736000 Strong transcription Duodenum Mucosa Duodenum
8 chr2:10706000-10713800 Weak transcription HSMMtube muscle
9 chr2:10706400-10713800 Weak transcription Brain Substantia Nigra brain
10 chr2:10706400-10716000 Weak transcription Fetal Kidney kidney
11 chr2:10706400-10716600 Strong transcription Fetal Intestine Small intestine
12 chr2:10707400-10728800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr2:10708400-10713000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr2:10708600-10712200 Strong transcription Gastric stomach
15 chr2:10708600-10718600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
16 chr2:10708600-10718800 Strong transcription Primary T cells from cord blood blood
17 chr2:10708600-10719600 Strong transcription Primary T helper cells fromperipheralblood blood
18 chr2:10708600-10720000 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr2:10708600-10727000 Strong transcription Primary T regulatory cells fromperipheralblood blood
20 chr2:10708600-10732000 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr2:10708800-10712200 Strong transcription H9 Cell Line embryonic stem cell
22 chr2:10708800-10712400 Strong transcription Thymus Thymus
23 chr2:10708800-10713000 Strong transcription Aorta Aorta
24 chr2:10708800-10713200 Strong transcription Stomach Smooth Muscle stomach
25 chr2:10708800-10716000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr2:10708800-10718400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:10708800-10720600 Strong transcription Fetal Intestine Large intestine
28 chr2:10708800-10732800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr2:10709000-10712600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr2:10709000-10712600 Strong transcription Brain Cingulate Gyrus brain
31 chr2:10709000-10712600 Strong transcription Esophagus oesophagus
32 chr2:10709000-10712600 Strong transcription Sigmoid Colon Sigmoid Colon
33 chr2:10709000-10718200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
34 chr2:10709000-10718600 Strong transcription Dnd41 blood
35 chr2:10709000-10719000 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr2:10709000-10719000 Strong transcription Rectal Mucosa Donor 31 rectum
37 chr2:10709000-10719200 Strong transcription Primary T helper naive cells fromperipheralblood blood
38 chr2:10709000-10725800 Strong transcription Primary B cells from peripheral blood blood
39 chr2:10709000-10726600 Strong transcription Primary monocytes fromperipheralblood blood
40 chr2:10709200-10712200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr2:10709200-10712400 Strong transcription Skeletal Muscle Male skeletal muscle
42 chr2:10709200-10712600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr2:10709200-10712800 Strong transcription Rectal Smooth Muscle rectum
44 chr2:10709200-10714000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr2:10709200-10715600 Strong transcription HSMM muscle
46 chr2:10709200-10718600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr2:10709200-10718600 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr2:10709200-10719200 Strong transcription Liver Liver
49 chr2:10709200-10719800 Strong transcription HepG2 liver
50 chr2:10709200-10746800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015