The 2.0 version of rSNPBase

Variant report

Variant rs59399536
Chromosome Location chr2:10707667-10707668
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10688200-10708800 Weak transcription H9 Cell Line embryonic stem cell
2 chr2:10689200-10710600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr2:10692200-10709600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr2:10693000-10708800 Weak transcription NHEK skin
5 chr2:10694200-10710000 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr2:10696000-10709200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr2:10696000-10710200 Weak transcription Left Ventricle heart
8 chr2:10696600-10710000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr2:10697600-10708800 Weak transcription Thymus Thymus
10 chr2:10698000-10709000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr2:10698200-10709000 Weak transcription Dnd41 blood
12 chr2:10698200-10709800 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr2:10698600-10736600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr2:10698800-10709200 Weak transcription Rectal Smooth Muscle rectum
15 chr2:10698800-10710400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr2:10699000-10709000 Weak transcription Esophagus oesophagus
17 chr2:10699000-10709400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:10699000-10709800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr2:10699200-10708800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr2:10699200-10709200 Weak transcription Liver Liver
21 chr2:10699400-10709000 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr2:10699400-10711000 Weak transcription GM12878-XiMat blood
23 chr2:10699400-10716200 Weak transcription Fetal Brain Male brain
24 chr2:10699600-10709000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr2:10700400-10708800 Weak transcription Fetal Intestine Large intestine
26 chr2:10700800-10708800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:10700800-10709800 Weak transcription Placenta Placenta
28 chr2:10700800-10710200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr2:10700800-10710400 Weak transcription Fetal Brain Female brain
30 chr2:10701000-10709600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr2:10701400-10709200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr2:10701400-10710200 Weak transcription Colon Smooth Muscle Colon
33 chr2:10701600-10709000 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr2:10701800-10708600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr2:10701800-10708600 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr2:10701800-10708800 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr2:10701800-10710000 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr2:10702000-10708600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr2:10702000-10709000 Weak transcription Brain Cingulate Gyrus brain
40 chr2:10702000-10709200 Weak transcription Right Ventricle heart
41 chr2:10702000-10710200 Weak transcription Ovary ovary
42 chr2:10702000-10710200 Weak transcription Right Atrium heart
43 chr2:10702000-10715800 Weak transcription Hela-S3 cervix
44 chr2:10702000-10717400 Weak transcription Psoas Muscle Psoas
45 chr2:10702200-10710400 Weak transcription H1 Cell Line embryonic stem cell
46 chr2:10702200-10713800 Weak transcription K562 blood
47 chr2:10703400-10710200 Weak transcription Primary hematopoietic stem cells blood
48 chr2:10704000-10709600 Weak transcription Primary T cells fromperipheralblood blood
49 chr2:10704200-10709000 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr2:10704200-10709000 Weak transcription HepG2 liver

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015